Chaste
From MaRDI portal
Cited in
(92)- OpenCarp
- BioFVM
- BioFVM-X
- The study of the influence of heart ventricular wall thickness on pseudo-ECG
- Three-dimensional spatiotemporal modeling of colon cancer organoids reveals that multimodal control of stem cell self-renewal is a critical determinant of size and shape in early stages of tumor growth
- Approximate Bayesian computation reveals the importance of repeated measurements for parameterising cell-based models of growing tissues
- Very high order finite volume methods for cardiac electrophysiology
- A multicellular model of intestinal crypt buckling and fission
- Multi-scale modeling of APC and \(\beta \)-catenin regulation in the human colonic crypt
- CellML
- Modelling the role of the basement membrane beneath a growing epithelial monolayer
- Mathematical modeling of monoclonal conversion in the colonic crypt
- Multispecies model of cell lineages and feedback control in solid tumors
- MCELL
- Global Arrays
- Non-conforming finite-element formulation for cardiac electrophysiology: an effective approach to reduce the computation time of heart simulations without compromising accuracy
- Induced drift of scroll waves in the Aliev-Panfilov model and in an axisymmetric heart left ventricle
- A 3D multiscale model to explore the role of EGFR overexpression in tumourigenesis
- Maintaining the proliferative cell niche in multicellular models of epithelia
- Modelling cellular interactions and dynamics during kidney morphogenesis
- Derivation of continuum models from discrete models of mechanical forces in cell populations
- Modelling realistic 3D deformations of simple epithelia in dynamic homeostasis
- parest_dae
- An efficient isogeometric collocation approach to cardiac electrophysiology
- BioFVM-X: an MPI+OpenMP 3-D simulator for biological systems
- PERMIX
- Targeting cellular DNA damage responses in cancer: an in vitro-calibrated agent-based model simulating monolayer and spheroid treatment responses to ATR-inhibiting drugs
- Time domain spectral element-based wave finite element method for periodic structures
- A comparison of fourth-order operator splitting methods for cardiac simulations
- Integrated heart -- coupling multiscale and multiphysics models for the simulation of the cardiac function
- A diffuse interface framework for modeling the evolution of multi-cell aggregates as a soft packing problem driven by the growth and division of cells
- Cell cycle regulation of oscillations yields coupling of growth and form in a computational model of the presomitic mesoderm
- OpenCMISS
- Application of stochastic phenomenological modelling to cell-to-cell and beat-to-beat electrophysiological variability in cardiac tissue
- A review of spatial computational models for multi-cellular systems, with regard to intestinal crypts and colorectal cancer development
- Approaches for the estimation of timescales in nonlinear dynamical systems: timescale separation in enzyme kinetics as a case study
- A kinetic model to study the regulation of \(\beta \)-catenin, APC, and axin in the human colonic crypt
- Buckling of a growing tissue and the emergence of two-dimensional patterns
- CSIM
- LBM-EP
- The formation of tight tumor clusters affects the efficacy of cell cycle inhibitors: a hybrid model study
- Spline Toolbox
- Beatbox
- Multiphysics computational modeling in \(\mathcal{C}\mathbf{Heart}\)
- The significant effect of the choice of ionic current integration method in cardiac electro-physiological simulations
- A theoretical investigation of the effect of proliferation and adhesion on monoclonal conversion in the colonic crypt
- Extending BACOLI to solve the monodomain model
- A hybrid approach to multi-scale modelling of cancer
- Seg3D
- Computational and numerical methods for the efficient and accurate solution of the bidomain equations
- LBIBCell
- Efficient simulation of cardiac electrical propagation using high-order finite elements. II: Adaptive \(p\)-version
- Simulation of cardiac electrophysiology on next-generation high-performance computers
- JSim
- Nutils
- Ani3D
- VirtualLeaf
- VCell
- FunC
- PyCml
- Efficient simulation of cardiac electrical propagation using high order finite elements
- PhysiCell
- CompuCell3D
- High-order operator splitting for the bidomain and monodomain models
- Morpheus
- On the identification of multiple space dependent ionic parameters in cardiac electrophysiology modelling
- CellAnimation
- SBRML
- cPath
- Numerical Simulations for Cardiac Electrophysiology Problems
- Direct Function Evaluation versus Lookup Tables: When to Use Which?
- Automated adjoints of coupled PDE-ODE systems
- Numerical analysis of the immersed boundary method for cell-based simulation
- CellSys
- Biocellion
- EmbryoMaker
- Microvessel Chaste
- Boids
- cbcbeat
- Homogenization Model for Aberrant Crypt Foci
- Numerical solution of the localized inverse problem of electrocardiography
- pflamelet
- GEMS
- OpenCOR
- HAL
- HyperHDG
- Chaste: A test-driven approach to software development for biological modelling
- Models, measurement and inference in epithelial tissue dynamics
- Impact of force function formulations on the numerical simulation of centre-based models
- Lattice Boltzmann method for parallel simulations of cardiac electrophysiology using GPUs
- Operator splitting for the bidomain model revisited
- Stability analysis of the POD reduced order method for solving the bidomain model in cardiac electrophysiology
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