Circular codes in archaeal genomes

DOI10.1016/S0022-5193(03)00119-XMaRDI QIDQ2177299zbMATH OpenOpenAlexWikidataFDO

Authors Gabriel Frey, Christian J. Michel

Publication date 6 May 2020

Published in Journal of Theoretical Biology (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/s0022-5193(03)00119-x

zbMATH Keywords

frametrinucleotidegenesstatistical methodcircular codesarchaeal genomes

Mathematics Subject Classification ID

Applications of statistics to biology and medical sciences; meta analysis (62P10) Genetics and epigenetics (92D10) Microbiology (92C70)

Recommendations

• Circular codes revisited: a statistical approach
• Identification of circular codes in bacterial genomes and their use in a factorization method for retrieving the reading frames of genes
• Identification of all trinucleotide circular codes
• Mixed circular codes
• scientific article; zbMATH DE number 1342318

Cites work

• scientific article; zbMATH DE number 1988973 (Why is no real title available?)
• An evolutionary analytical model of a complementary circular code simulating the protein coding genes, the \(5'\) and \(3'\) regions

Cited in

(18)

• Plant microRNA detection using the circular code information
• Dinucleotide circular codes
• Varieties of comma-free codes
• A relation between trinucleotide comma-free codes and trinucleotide circular codes
• Circular tessera codes in the evolution of the genetic code
• Genome galaxy identified by the circular code theory
• Identification of circular codes in bacterial genomes and their use in a factorization method for retrieving the reading frames of genes
• Reading frame retrieval of genes: a new parameter of codon usage based on the circular code theory
• An analytical model of gene evolution with six mutation parameters: An application to archaeal circular codes
• A possible code in the genetic code
• Mixed circular codes
• Essential molecular functions associated with the circular code evolution
• Circular codes revisited: a statistical approach
• Circular code motifs in genomes of eukaryotes
• Maximal dinucleotide and trinucleotide circular codes
• The maximal \(C^3\) self-complementary trinucleotide circular code \(X\) in genes of bacteria, eukaryotes, plasmids and viruses
• A 2006 review of circular codes in genes
• A permuted set of a trinucleotide circular code coding the 20 amino acids in variant nuclear codes

This page was built for publication: Circular codes in archaeal genomes

Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q2177299)