Implicit and semi-implicit numerical schemes for the gradient flow of the formation of biological transport networks

DOI10.5802/SMAI-JCM.59MaRDI QIDQ2178652zbMATHzbMATHOpenAlexFDO

Authors Di Fang, Shi Jin, Peter Alexander Markowich, Ben{ôı}t Perthame

Publication date 11 May 2020

Published in The SMAI journal of computational mathematics (Search for Journal in Brave)

Full work available at URL https://doi.org/10.5802/smai-jcm.59

zbMATH Keywords

gradient flownumerical schemesbiological transport networks

Mathematics Subject Classification ID

Nonlinear elliptic equations (35J60) Reaction-diffusion equations (35K57) PDEs in connection with biology, chemistry and other natural sciences (35Q92) Finite difference methods for initial value and initial-boundary value problems involving PDEs (65M06) Flows in porous media; filtration; seepage (76S05) Physiological flows (76Z05) Physiological flow (92C35) PDEs on graphs and networks (ramified or polygonal spaces) (35R02) Classical flows, reactions, etc. in chemistry (92E20)

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Cites work

• scientific article; zbMATH DE number 2066946 (Why is no real title available?)
• scientific article; zbMATH DE number 3338857 (Why is no real title available?)
• A mesoscopic model of biological transportation networks
• Analysis and applications of the exponential time differencing schemes and their contour integration modifications
• Biological transportation networks: Modeling and simulation
• Mathematical Analysis of a PDE System for Biological Network Formation
• Nonlinear stability of the implicit-explicit methods for the Allen-Cahn equation
• Notes on a PDE system for biological network formation
• ODE- and PDE-based modeling of biological transportation networks

Cited in

(9)

• On the blow-up criterion and global existence of a nonlinear PDE system in biological transport networks
• Efficient quantum algorithm for nonlinear reaction-diffusion equations and energy estimation
• Supplementary variable method for structure-preserving approximations to partial differential equations with deduced equations
• Energy-production-rate preserving numerical approximations to network generating partial differential equations
• Optimisation of biological transport networks
• Computational Science and Its Applications – ICCSA 2004
• Discontinuous Galerkin methods for network patterning phase-field models
• An optimization principle for initiation and adaptation of biological transport networks
• A modified and efficient phase field model for the biological transport network

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