How tree-based is my network? Proximity measures for unrooted phylogenetic networks

DOI10.1016/j.dam.2019.12.019zbMath1444.92071arXiv1906.06163OpenAlexW3000744837WikidataQ126318733 ScholiaQ126318733MaRDI QIDQ2192067

Mareike Fischer, Andrew R. Francis

Publication date: 29 June 2020

Published in: Discrete Applied Mathematics (Search for Journal in Brave)

Full work available at URL: https://arxiv.org/abs/1906.06163

zbMATH Keywords

proximity measurestree-based phylogenetic networksunrooted phylogenetic networks

Mathematics Subject Classification ID

Problems related to evolution (92D15) Systems biology, networks (92C42)

Related Items (3)

Rooted NNI moves and distance-1 tail moves on tree-based phylogenetic networks ⋮ How far is my network from being edge-based? Proximity measures for edge-basedness of unrooted phylogenetic networks ⋮ A Structure Theorem for Rooted Binary Phylogenetic Networks and Its Implications for Tree-Based Networks

Uses Software

• Mathematica
• TreeBASE

Cites Work

• Transforming phylogenetic networks: moving beyond tree space
• Tree-based networks: characterisations, metrics, and support trees
• Tree-based unrooted phylogenetic networks
• Tree-based unrooted nonbinary phylogenetic networks
• The space of tree-based phylogenetic networks
• New characterisations of tree-based networks and proximity measures
• Correction to: ``Tree-based unrooted phylogenetic networks
• Phylogeny

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