Predicting rRNA-, RNA-, and DNA-binding proteins from primary structure with support vector machines
DOI10.1016/J.JTBI.2005.09.018zbMATH Open1447.92318OpenAlexW2079120335WikidataQ45966250 ScholiaQ45966250MaRDI QIDQ2202097FDOQ2202097
Authors: Xiaojing Yu, Jianping Cao, Tieliu Shi, Yixue Li, Yu-Dong Cai 
Publication date: 17 September 2020
Published in: Journal of Theoretical Biology (Search for Journal in Brave)
Full work available at URL: https://doi.org/10.1016/j.jtbi.2005.09.018
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support vector machines (SVMs)protein function predictionRNA-binding proteinDNA-binding proteinrRNA-binding protein
Applications of statistics to biology and medical sciences; meta analysis (62P10) Protein sequences, DNA sequences (92D20) Computational methods for problems pertaining to biology (92-08)
Cites Work
Cited In (9)
- Computational Science - ICCS 2004
- Comprehensive comparative analysis and identification of RNA-binding protein domains: multi-class classification and feature selection
- Prediction of FMN-binding residues with three-dimensional probability distributions of interacting atoms on protein surfaces
- Predicting DNA- and RNA-binding proteins from sequences with kernel methods
- Neural network and SVM classifiers accurately predict lipid binding proteins, irrespective of sequence homology
- Predicting DNA binding proteins using support vector machine with hybrid fractal features
- Protein function classification via support vector machine approach
- RBSURFpred: modeling protein accessible surface area in real and binary space using regularized and optimized regression
- Prediction of RNA-protein interactions by combining deep convolutional neural network with feature selection ensemble method
Uses Software
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