Predicting DNA binding proteins using support vector machine with hybrid fractal features
DOI10.1016/J.JTBI.2013.10.009zbMATH Open1411.92108OpenAlexW2041797567WikidataQ47201750 ScholiaQ47201750MaRDI QIDQ2632482FDOQ2632482
Authors: Xiao-Hui Niu, Xuehai Hu, Feng Shi, Jingbo Xia 
Publication date: 14 May 2019
Published in: Journal of Theoretical Biology (Search for Journal in Brave)
Full work available at URL: https://doi.org/10.1016/j.jtbi.2013.10.009
Recommendations
Biochemistry, molecular biology (92C40) Protein sequences, DNA sequences (92D20) Fractals (28A80) Computational methods for problems pertaining to biology (92-08)
Cites Work
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- Techniques in fractal geometry
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- Some remarks on protein attribute prediction and pseudo amino acid composition
- Predicting DNA- and RNA-binding proteins from sequences with kernel methods
- Predicting rRNA-, RNA-, and DNA-binding proteins from primary structure with support vector machines
- Advances in the implementation of the box-counting method of fractal dimension estimation
- Predicting membrane protein types by fusing composite protein sequence features into pseudo amino acid composition
- Fractals related to long DNA sequences and complete genomes
- Chaos game representation of protein sequences based on the detailed HP model and their multifractal and correlation analyses
- Prediction of protein structural classes by recurrence quantification analysis based on chaos game representation
- A classification-based prediction model of messenger RNA polyadenylation sites
- A new hybrid fractal algorithm for predicting thermophilic nucleotide sequences
Cited In (5)
- Comparative analysis of bacterial essential and nonessential genes with Hurst exponent based on chaos game representation
- Backbone fractal dimension and fractal hybrid orbital of protein structure
- A new hybrid fractal algorithm for predicting thermophilic nucleotide sequences
- Predicting DNA- and RNA-binding proteins from sequences with kernel methods
- Effective DNA binding protein prediction by using key features via Chou's general PseAAC
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