Chaos game representation of protein sequences based on the detailed HP model and their multifractal and correlation analyses
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Publication:2187487
DOI10.1016/J.JTBI.2003.09.009zbMATH Open1439.92148OpenAlexW2077715995WikidataQ52007252 ScholiaQ52007252MaRDI QIDQ2187487FDOQ2187487
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Cites work
- Avoided strings in bacterial complete genomes and a related combinatorial problem
- Dimensions of fractals related to languages defined by tagged strings in complete genomes
- Distance, correlation and mutual information among portraits of organisms based on complete genomes
- Fractal measures and their singularities: The characterization of strange sets
- Fractals related to long DNA sequences and complete genomes
- Multifractal analysis of DNA sequences using a novel chaos-game representation
- Multifractality in time series
- The infinite number of generalized dimensions of fractals and strange attractors
Cited in
(23)- Emergence of the Sierpinski gasket in coin-dividing problems
- Chaos Game Representation
- Predicting DNA binding proteins using support vector machine with hybrid fractal features
- Similarity analysis for DNA sequences based on chaos game representation. Case study: the albumin
- Multifractal detrended cross-correlation analysis of genome sequences using chaos-game representation
- Multifractal analysis and topological properties of a new family of weighted Koch networks
- Analysis of similarity/dissimilarity of DNA sequences based on chaos game representation
- A fractal method to distinguish coding and non-coding sequences in a complete genome based on a number sequence representation
- Prediction of protein structural classes by recurrence quantification analysis based on chaos game representation
- Critical node detection problem for complex network in undirected weighted networks
- Multifractal temporally weighted detrended cross-correlation analysis of multivariate time series
- iPPI-PseAAC(CGR): identify protein-protein interactions by incorporating chaos game representation into PseAAC
- Determination of multifractal dimensions of complex networks by means of the sandbox algorithm
- Comparative analysis of bacterial essential and nonessential genes with Hurst exponent based on chaos game representation
- Multifractal analysis for core-periphery structure of complex networks
- Multifractal nature of network induced time delay in networked control systems
- Multifractality and Laplace spectrum of horizontal visibility graphs constructed from fractional Brownian motions
- Rényi continuous entropy of DNA sequences
- A new hybrid fractal algorithm for predicting thermophilic nucleotide sequences
- Identifying anticancer peptides by using a generalized chaos game representation
- Fractal and complex network analyses of protein molecular dynamics
- Fractal approximation of chaos game representations using recurrent iterated function systems
- A two-stage SVM method to predict membrane protein types by incorporating amino acid classifications and physicochemical properties into a general form of Chou's PseAAC
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