Distance, correlation and mutual information among portraits of organisms based on complete genomes

DOI10.1016/S0375-9601(01)00336-XzbMath0969.92507OpenAlexW1977771144WikidataQ126812304 ScholiaQ126812304MaRDI QIDQ5937768

Po Jiang, Zu-Guo Yu

Publication date: 15 July 2001

Published in: Physics Letters. A (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/s0375-9601(01)00336-x

zbMATH Keywords

white noiseevolution treesrandom nucleotide sequence

Mathematics Subject Classification ID

Protein sequences, DNA sequences (92D20)

Related Items (4)

Key-string segmentation algorithm and higher-order repeat 16mer (54 copies) in human alpha satellite DNA in chromosome 7 ⋮ Chaos game representation of protein sequences based on the detailed HP model and their multifractal and correlation analyses ⋮ The genomic tree of living organisms based on a fractal model ⋮ A fractal method to distinguish coding and non-coding sequences in a complete genome based on a number sequence representation

Cites Work

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• Fractals related to long DNA sequences and complete genomes
• Dimensions of fractals related to languages defined by tagged strings in complete genomes
• Understanding long-range correlations in DNA sequences
• A time series model of CDS sequences in complete genome
• Avoided strings in bacterial complete genomes and a related combinatorial problem
• Time series model based on global structure of complete genome

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