Time series model based on global structure of complete genome

DOI10.1016/S0960-0779(00)00147-8zbMath0979.92015arXivphysics/0006071OpenAlexW1981479878MaRDI QIDQ5951000

Zu-Guo Yu, V. V. Anh

Publication date: 3 January 2002

Published in: Chaos, Solitons and Fractals (Search for Journal in Brave)

Full work available at URL: https://arxiv.org/abs/physics/0006071

zbMATH Keywords

complete genomecorrelation dimensionsHurst exponentsnucleotide sequences

Mathematics Subject Classification ID

Biochemistry, molecular biology (92C40) Time series analysis of dynamical systems (37M10)

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Fourier transform and mean quadratic variation of Bernoulli convolution on homogeneous Cantor set, Analysis of similarity/dissimilarity of DNA sequences based on chaos game representation, The genomic tree of living organisms based on a fractal model, Investigation on series of length of coding and non-coding DNA sequences of bacteria using multifractal detrended cross-correlation analysis, Distance, correlation and mutual information among portraits of organisms based on complete genomes, Multifractal characterisation of length sequences of coding and noncoding segments in a complete genome

Cites Work

• Measuring the strangeness of strange attractors
• Fractals related to long DNA sequences and complete genomes
• Dimensions of fractals related to languages defined by tagged strings in complete genomes
• A time series model of CDS sequences in complete genome
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