Cd-hit
From MaRDI portal
Cited in
(only showing first 100 items - show all)- SubChlo: predicting protein subchloroplast locations with pseudo-amino acid composition and the evidence-theoretic \(K\)-nearest neighbor (ET-KNN) algorithm
- Rfam
- PSSM-Suc: accurately predicting succinylation using position specific scoring matrix into bigram for feature extraction
- BlaPred: predicting and classifying -lactamase using a 3-tier prediction system via Chou's general PseAAC
- Predicting membrane protein types by incorporating protein topology, domains, signal peptides, and physicochemical properties into the general form of Chou's pseudo amino acid composition
- Prediction and functional analysis of prokaryote lysine acetylation site by incorporating six types of features into Chou's general PseAAC
- Analysis and prediction of animal toxins by various Chou's pseudo components and reduced amino acid compositions
- Identifying anticancer peptides by using a generalized chaos game representation
- BioJava
- Adaptive compressive learning for prediction of protein-protein interactions from primary sequence
- Predicting protein subchloroplast locations with both single and multiple sites via three different modes of Chou's pseudo amino acid compositions
- Computational identification of N4-methylcytosine sites in the mouse genome with machine-learning method
- DeepMRMP: a new predictor for multiple types of RNA modification sites using deep learning
- RLF-LPI: an ensemble learning framework using sequence information for predicting lncRNA-protein interaction based on AE-ResLSTM and fuzzy decision
- Approximate hashing for bioinformatics
- ViennaRNA
- HMMER
- bioperl
- Predicting ion channels and their types by the dipeptide mode of pseudo amino acid composition
- A new hybrid fractal algorithm for predicting thermophilic nucleotide sequences
- EMBOSS
- PSIPRED
- Prediction of \(\beta\)-lactamase and its class by Chou's pseudo-amino acid composition and support vector machine
- Sequence-based discrimination of protein-RNA interacting residues using a probabilistic approach
- Feature extraction by statistical contact potentials and wavelet transform for predicting subcellular localizations in gram negative bacterial proteins
- \textit{De novo} clustering of long-read transcriptome data using a greedy, quality-value based algorithm
- Neural network and SVM classifiers accurately predict lipid binding proteins, irrespective of sequence homology
- ECS: an automatic enzyme classifier based on functional domain composition
- MUSCLE
- Accurate in silico identification of protein succinylation sites using an iterative semi-supervised learning technique
- Prediction of pupylation sites using the composition of k-spaced amino acid pairs
- Predicting DNA binding proteins using support vector machine with hybrid fractal features
- Analysis and identification of toxin targets by topological properties in protein-protein interaction network
- MEME
- PseAAC
- HMMTOP
- AUTO-MUTE
- HHblits
- CRYSTALP2
- PROFEAT
- Mugsy
- Prodigal
- ELM
- PredGPI
- PSI-BLAST
- PROSITE
- BLAST
- A method to distinguish between lysine acetylation and lysine methylation from protein sequences
- Data mining techniques for the life sciences
- Sigfind
- UniProt
- ESLpred
- PseAAC-Builder
- LOCSVMPSI
- VGIchan
- Jalview
- BMGE
- Pfam
- DORAEMON
- MetaSim
- trimAl
- ONE
- PINGU
- HSEpred
- Naïve Bayes classifier with feature selection to identify phage virion proteins
- MITOPRED
- Hum-mPLoc
- DIMA
- PIPE
- Phobius
- EnsemblePail
- isONclust
- MeShClust
- DNACLUST
- Starcode
- EasyCluster2
- parasail
- LSC
- Cogent
- Grouper
- Corset
- SlideSort
- Rainbow
- d2_cluster
- QuickGO
- PSoL
- Using ensemble methods to deal with imbalanced data in predicting protein-protein interactions
- iTOL
- PseKRAAC
- phyloXML
- OCTOPUS
- NestedMICA
- PSLpred
- Bioinformatics. Volume I. Data, sequence analysis, and evolution
- ExpertRNA: A New Framework for RNA Secondary Structure Prediction
- Better greedy sequence clustering with fast banded alignment
- pSLIP
- Esub8
- Sulfinator
- TEIRESIAS
This page was built for software: Cd-hit
