PseAAC

swMATH16469MaRDI QIDQ28339FDOQ28339

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Official website: http://www.csbio.sjtu.edu.cn/bioinf/PseAA/

Cited In (89)

• Discriminating bioluminescent proteins by incorporating average chemical shift and evolutionary information into the general form of Chou's pseudo amino acid composition
• A set of descriptors for identifying the protein-drug interaction in cellular networking
• hCKSAAP_UbSite
• DeepVF
• Adaptive compressive learning for prediction of protein-protein interactions from primary sequence
• NL MIND-BEST: a web server for ligands and proteins discovery -- theoretic-experimental study of proteins of \textit{Giardia lamblia} and new compounds active against \textit{Plasmodium falciparum}
• iCDI-PseFpt: identify the channel-drug interaction in cellular networking with PseAAC and molecular fingerprints
• Predicting protein submitochondrial locations by incorporating the pseudo-position specific scoring matrix into the general Chou's pseudo-amino acid composition
• Predicting protein structural class based on multi-features fusion
• Prediction of protein submitochondria locations based on data fusion of various features of sequences
• Predicting Golgi-resident protein types using pseudo amino acid compositions: approaches with positional specific physicochemical properties
• Machine learning approaches for discrimination of extracellular matrix proteins using hybrid feature space
• Identify five kinds of simple super-secondary structures with quadratic discriminant algorithm based on the chemical shifts
• Prediction of protein structure classes by incorporating different protein descriptors into general Chou's pseudo amino acid composition
• Classification of membrane protein types using voting feature interval in combination with Chou's pseudo amino acid composition
• Predicting protein fold pattern with functional domain and sequential evolution information
• Some remarks on protein attribute prediction and pseudo amino acid composition
• Cell-PLoc
• SMART
• Memtype-2L
• Nuc-ploc
• iNuc-PseKNC
• ProtIdent
• Cd-hit
• PROFEAT
• PredGPI
• DIMA
• HyperChem
• CyclinPred
• EcmPred
• ESLpred
• Euk-PLoc
• GPCR-2L
• iLoc-Gpos
• GPCR-GIA
• iLoc-Animal
• iLoc-Hum
• iEzy-drug
• LOCSVMPSI
• PECM
• propy
• PseAAC-Builder
• ngLOC
• PseDNA-Pro
• PseAAC-General
• Quat-2L
• QuatIdent
• Pfam
• SubChlo
• SubMito-PSPCP
• HSEpred
• GPCR-CA
• NL MIND-BEST
• AAindex
• EzyPred
• Gpos-PLoc
• Hum-PLoc
• PIPE
• SCPRED
• Bio-AIMS
• MARCH-INSIDE
• LORIS
• OCTOPUS
• iCDI-PseFpt
• SODOCK
• ESLpred2
• PairProSVM
• PROFcon
• Using the concept of Chou's pseudo amino acid composition for risk type prediction of human papillomaviruses
• Predicting membrane protein types by incorporating protein topology, domains, signal peptides, and physicochemical properties into the general form of Chou's pseudo amino acid composition
• Prediction of GABA\(_{\mathrm A}\) receptor proteins using the concept of Chou's pseudo-amino acid composition and support vector machine
• pSLIP
• Esub8
• BLProt
• Enzymes/non-enzymes classification model complexity based on composition, sequence, 3D and topological indices
• Predicting protein structural classes with pseudo amino acid composition: an approach using geometric moments of cellular automaton image
• Prediction of Golgi-resident protein types using general form of Chou's pseudo-amino acid compositions: approaches with minimal redundancy maximal relevance feature selection
• UPFPSR
• Neural network and SVM classifiers accurately predict lipid binding proteins, irrespective of sequence homology
• Protein fold recognition by alignment of amino acid residues using kernelized dynamic time warping
• SVM-Prot
• Prediction of \(\beta\)-lactamase and its class by Chou's pseudo-amino acid composition and support vector machine
• Chou's pseudo amino acid composition improves sequence-based antifreeze protein prediction
• SubChlo: predicting protein subchloroplast locations with pseudo-amino acid composition and the evidence-theoretic \(K\)-nearest neighbor (ET-KNN) algorithm
• BlaPred: predicting and classifying \(\beta\)-lactamase using a 3-tier prediction system via Chou's general PseAAC
• Predicting protein-protein interactions by fusing various Chou's pseudo components and using wavelet denoising approach
• UPFPSR: a ubiquitylation predictor for plant through combining sequence information and random forest
• MFSC: multi-voting based feature selection for classification of Golgi proteins by adopting the general form of Chou's PseAAC components
• Global and local prediction of protein folding rates based on sequence autocorrelation information

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