Classification of membrane protein types using voting feature interval in combination with Chou's pseudo amino acid composition
From MaRDI portal
Publication:739723
DOI10.1016/j.jtbi.2015.07.034zbMath1343.92006OpenAlexW1485819570WikidataQ34490573 ScholiaQ34490573MaRDI QIDQ739723
Publication date: 19 August 2016
Published in: Journal of Theoretical Biology (Search for Journal in Brave)
Full work available at URL: https://doi.org/10.1016/j.jtbi.2015.07.034
Related Items
Predicting Golgi-resident protein types using pseudo amino acid compositions: approaches with positional specific physicochemical properties, IMem-2LSAAC: a two-level model for discrimination of membrane proteins and their types by extending the notion of SAAC into Chou's pseudo amino acid composition, Classify vertebrate hemoglobin proteins by incorporating the evolutionary information into the general PseAAC with the hybrid approach, Double-stage discretization approaches for biomarker-based bladder cancer survival modeling, pLoc\_bal-mGneg: predict subcellular localization of Gram-negative bacterial proteins by quasi-balancing training dataset and general PseAAC, iMethyl-STTNC: identification of N\(^6\)-methyladenosine sites by extending the idea of SAAC into Chou's PseAAC to formulate RNA sequences, Predicting membrane protein types by incorporating a novel feature set into Chou's general PseAAC, Prediction of Golgi-resident protein types using general form of Chou's pseudo-amino acid compositions: approaches with minimal redundancy maximal relevance feature selection, Machine learning approaches for discrimination of extracellular matrix proteins using hybrid feature space
Uses Software
Cites Work
- Unnamed Item
- Predicting plant protein subcellular multi-localization by Chou's PseAAC formulation based multi-label homolog knowledge transfer learning
- Predicting membrane protein types by fusing composite protein sequence features into pseudo amino acid composition
- Some remarks on protein attribute prediction and pseudo amino acid composition
- Predicting membrane protein types by incorporating protein topology, domains, signal peptides, and physicochemical properties into the general form of Chou's pseudo amino acid composition
- Prediction of GABA\(_{\mathrm A}\) receptor proteins using the concept of Chou's pseudo-amino acid composition and support vector machine
- Using stacked generalization to predict membrane protein types based on pseudo-amino acid composition
- Pseudo amino acid composition and multi-class support vector machines approach for conotoxin superfamily classification
- Prediction of apoptosis protein subcellular location using improved hybrid approach and pseudo-amino acid composition
- MemHyb: predicting membrane protein types by hybridizing SAAC and PSSM
- Discrimination of acidic and alkaline enzyme using Chou's pseudo amino acid composition in conjunction with probabilistic neural network model
- A two-stage SVM method to predict membrane protein types by incorporating amino acid classifications and physicochemical properties into a general form of Chou's PseAAC