Predicting Golgi-resident protein types using pseudo amino acid compositions: approaches with positional specific physicochemical properties

DOI10.1016/J.JTBI.2015.11.009MaRDI QIDQ304850zbMATH OpenOpenAlexWikidataFDO

Publication date 26 August 2016

Published in Journal of Theoretical Biology (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.jtbi.2015.11.009

Biochemistry, molecular biology (92C40) Molecular structure (graph-theoretic methods, methods of differential topology, etc.) (92E10)

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Cites work

scientific article; zbMATH DE number 823069 (Why is no real title available?)
Classification of membrane protein types using voting feature interval in combination with Chou's pseudo amino acid composition
Gram-positive and Gram-negative protein subcellular localization by incorporating evolutionary-based descriptors into Chou's general PseAAC
Prediction of \(\beta\)-lactamase and its class by Chou's pseudo-amino acid composition and support vector machine
Some remarks on protein attribute prediction and pseudo amino acid composition
SubChlo: predicting protein subchloroplast locations with pseudo-amino acid composition and the evidence-theoretic \(K\)-nearest neighbor (ET-KNN) algorithm
\textbf{iLoc-Virus}: a multi-label learning classifier for identifying the subcellular localization of virus proteins with both single and multiple sites

Cited in

(4)

Modeling sphingomyelin synthase 1 driven reaction at the Golgi apparatus can explain data by inclusion of a positive feedback mechanism
Prediction of Golgi-resident protein types using general form of Chou's pseudo-amino acid compositions: approaches with minimal redundancy maximal relevance feature selection
Predicting protein sub-Golgi locations by combining functional domain enrichment scores with pseudo-amino acid compositions
MFSC: multi-voting based feature selection for classification of Golgi proteins by adopting the general form of Chou's PseAAC components

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