Predicting membrane protein types by fusing composite protein sequence features into pseudo amino acid composition

Applications of statistics to biology and medical sciences; meta analysis (62P10) Learning and adaptive systems in artificial intelligence (68T05) Protein sequences, DNA sequences (92D20) Cell biology (92C37)

Cites Work

Pattern classification.
Title not available (Why is that?)
The modified Mahalanobis discriminant for predicting outer membrane proteins by using Chou's pseudo amino acid composition
Using the augmented Chou's pseudo amino acid composition for predicting protein submitochondria locations based on auto covariance approach
Using Chou's amphiphilic pseudo-amino acid composition and support vector machine for prediction of enzyme subfamily classes
A novel representation for apoptosis protein subcellular localization prediction using support vector machine
Using stacked generalization to predict membrane protein types based on pseudo-amino acid composition
Machine learning based adaptive watermark decoding in view of anticipated attack
A network-QSAR model for prediction of genetic-component biomarkers in human colorectal cancer

Cited In (27)

MemHyb: predicting membrane protein types by hybridizing SAAC and PSSM
Using protein granularity to extract the protein sequence features
IMem-2LSAAC: a two-level model for discrimination of membrane proteins and their types by extending the notion of SAAC into Chou's pseudo amino acid composition
Predicting membrane protein types by incorporating a novel feature set into Chou's general PseAAC
Machine learning approaches for discrimination of extracellular matrix proteins using hybrid feature space
Classification of membrane protein types using voting feature interval in combination with Chou's pseudo amino acid composition
Application of residue distribution along the sequence for discriminating outer membrane proteins
Studies on the rules of \(\beta\)-strand alignment in a protein \(\beta\)-sheet structure
A novel canonical dual computational approach for prion AGAAAAGA amyloid fibril molecular modeling
Prediction of \(\beta\)-turn types in protein by using composite vector
Discriminating bioluminescent proteins by incorporating average chemical shift and evolutionary information into the general form of Chou's pseudo amino acid composition
A feature extraction technique using bi-gram probabilities of position specific scoring matrix for protein fold recognition
Predicting membrane protein types by incorporating protein topology, domains, signal peptides, and physicochemical properties into the general form of Chou's pseudo amino acid composition
Detrended cross-correlation coefficient: application to predict apoptosis protein subcellular localization
CE-PLoc: An ensemble classifier for predicting protein subcellular locations by fusing different modes of pseudo amino acid composition
Neural network and SVM classifiers accurately predict lipid binding proteins, irrespective of sequence homology
Sequence-dependent prediction of recombination hotspots in \textit{Saccharomyces cerevisiae}
Predicting DNA binding proteins using support vector machine with hybrid fractal features
A set of descriptors for identifying the protein-drug interaction in cellular networking
A two-stage SVM method to predict membrane protein types by incorporating amino acid classifications and physicochemical properties into a general form of Chou's PseAAC
Prediction of protein structure classes using hybrid space of multi-profile Bayes and bi-gram probability feature spaces
Protein subcellular localization in human and hamster cell lines: employing local ternary patterns of fluorescence microscopy images
iRNA-PseKNC(2methyl): identify RNA 2'-O-methylation sites by convolution neural network and Chou's pseudo components
\textbf{iLoc-Virus}: a multi-label learning classifier for identifying the subcellular localization of virus proteins with both single and multiple sites
Predicting mycobacterial proteins subcellular locations by incorporating pseudo-average chemical shift into the general form of Chou's pseudo amino acid composition
iMethyl-STTNC: identification of N\(^6\)-methyladenosine sites by extending the idea of SAAC into Chou's PseAAC to formulate RNA sequences
MFSC: multi-voting based feature selection for classification of Golgi proteins by adopting the general form of Chou's PseAAC components

Uses Software

Cell-PLoc
Plant-mPLoc
Euk-mPLoc

This page was built for publication: Predicting membrane protein types by fusing composite protein sequence features into pseudo amino acid composition

Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q1670554)