Prediction of -turn types in protein by using composite vector

DOI10.1016/J.JTBI.2011.07.001MaRDI QIDQ1786366zbMATH OpenOpenAlexWikidataFDO

Authors Xiaobo Shi, Xiuzhen Hu, Shaobo Li, Xingxing Liu

Publication date 24 September 2018

Published in Journal of Theoretical Biology (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.jtbi.2011.07.001

zbMATH Keywords

distance valueincrement of diversity valueposition conservation scoring function valuesecondary structure informationsupport vector machine algorithm

Mathematics Subject Classification ID

Learning and adaptive systems in artificial intelligence (68T05) Protein sequences, DNA sequences (92D20)

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Cites work

• scientific article; zbMATH DE number 1332320 (Why is no real title available?)
• Prediction of the subcellular location of apoptosis proteins
• Support-vector networks

Cited in

(4)

• \(\gamma\)-turn types prediction in proteins using the two-stage hybrid neural discriminant model
• \(\gamma\)-Turn types prediction in proteins using the support vector machines
• A fourth type of secondary structure breaker
• Prediction by support vector machines and analysis by \(Z\)-score of poly-\(L\)-proline type II conformation based on local sequence

Describes a project that uses

Uses Software

• PROMOTIF
• LIBSVM

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