iRNA-PseKNC(2methyl): identify RNA 2'-O-methylation sites by convolution neural network and Chou's pseudo components
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Publication:1721769
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Cites work
- Natural language processing (almost) from scratch
- Predicting membrane protein types by fusing composite protein sequence features into pseudo amino acid composition
- Some remarks on protein attribute prediction and pseudo amino acid composition
- Using LogitBoost classifier to predict protein structural classes
- iPPI-PseAAC(CGR): identify protein-protein interactions by incorporating chaos game representation into PseAAC
- pLoc\_bal-mGneg: predict subcellular localization of Gram-negative bacterial proteins by quasi-balancing training dataset and general PseAAC
- pSuc-Lys: predict lysine succinylation sites in proteins with PseAAC and ensemble random forest approach
Cited in
(6)- Computational identification of N4-methylcytosine sites in the mouse genome with machine-learning method
- DeepMRMP: a new predictor for multiple types of RNA modification sites using deep learning
- Identifying N\(^6\)-methyladenosine sites using extreme gradient boosting system optimized by particle swarm optimizer
- Identifying 5-methylcytosine sites in RNA sequence using composite encoding feature into Chou's PseKNC
- iRNA-PseKNC
- iMethyl-STTNC: identification of N\(^6\)-methyladenosine sites by extending the idea of SAAC into Chou's PseAAC to formulate RNA sequences
Describes a project that uses
Uses Software
- PSNO
- iRSpot-Pse6NC
- BiRen
- iHyd-PseAAC
- pLoc_bal-mGpos
- iNuc-ext-PseTNC
- RMBase
- iUbiq-Lys
- iRO-3wPseKNC
- iEnhancer-EL
- 2L-piRNA
- Quokka
- iPPI-PseAAC
- PSOFuzzySVM-TMH
- iDNA6mA-PseKNC
- pLoc_bal-mHum
- pLoc-mHum
- iRNA-3typeA
- iRNA-PseU
- iProt-Sub
- iNuc-STNC
- iKcr-PseEns
- pLoc-mGneg
- iPromoter-2L
- iRSpot-EL
- iPreny-PseAAC
- iRNAm5C-PseDNC
- iRNA-2methyl
- iRNA-PseColl
- pLoc-mEuk
- pLoc-mAnimal
- iPhos-PseEn
- iPhos-PseEvo
- iHyd-PseCp
- iCar-PseCp
- pSumo-CD
- iPTM-mLys
- iNitro-Tyr
- iSNO-AAPair
- iSNO-PseAAC
- iMethyl-PseAAC
- iRNA-Methyl
- iRSpot-PseDNC
- PseKNC
- iSuc-PseOpt
- Prnam-PC
- Pse-in-One
- PseAAC-Builder
- propy
- pSuc-Lys
- Keras
- TensorFlow
- LogitBoost
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