propy

swMATH22402MaRDI QIDQ34194FDOQ34194

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Official website: https://www.ncbi.nlm.nih.gov/pubmed/23426256

Cited In (75)

• SPrenylC-PseAAC: a sequence-based model developed via Chou's 5-steps rule and general PseAAC for identifying S-prenylation sites in proteins
• Dforml(KNN)-PseAAC: detecting formylation sites from protein sequences using K-nearest neighbor algorithm via Chou's 5-step rule and pseudo components
• Naïve Bayes classifier with feature selection to identify phage virion proteins
• iCDI-PseFpt: identify the channel-drug interaction in cellular networking with PseAAC and molecular fingerprints
• Predicting protein subchloroplast locations with both single and multiple sites via three different modes of Chou's pseudo amino acid compositions
• Predicting Golgi-resident protein types using pseudo amino acid compositions: approaches with positional specific physicochemical properties
• IMem-2LSAAC: a two-level model for discrimination of membrane proteins and their types by extending the notion of SAAC into Chou's pseudo amino acid composition
• Machine learning approaches for discrimination of extracellular matrix proteins using hybrid feature space
• iLM-2L: a two-level predictor for identifying protein lysine methylation sites and their methylation degrees by incorporating K-gap amino acid pairs into Chou's general PseAAC
• Prediction of protein structure classes by incorporating different protein descriptors into general Chou's pseudo amino acid composition
• Classification of membrane protein types using voting feature interval in combination with Chou's pseudo amino acid composition
• Nuc-ploc
• PredLactamase
• PseAAC
• repDNA
• Acalpred
• iNuc-PseKNC
• PseKNC-General
• Cd-hit
• repRNA
• Discriminating bioluminescent proteins by incorporating average chemical shift and evolutionary information into the general form of Chou's pseudo amino acid composition
• pSuc-Lys: predict lysine succinylation sites in proteins with PseAAC and ensemble random forest approach
• MultiP-SChlo
• AGGRESCAN
• AFP-Pred
• CyclinPred
• EcmPred
• iDNA-Prot
• iAMP-2L
• iLoc-Virus
• iLoc-Gpos
• iLoc-Plant
• iDNA-Methyl
• iRSpot-TNCPseAAC
• iLoc-Animal
• iLoc-Hum
• iLoc-Euk
• iCTX-Type
• iRSpot-PseDNC
• iEzy-drug
• iSNO-PseAAC
• iSNO-AAPair
• iNuc-PhysChem
• iTIS-PseTNC
• MISVM
• PECM
• PseAAC-Builder
• pyLEMMINGS
• PseAAC-General
• RSARF
• DSPMP
• iRSpot-GAEnsC
• MemHyb
• NRPSpredictor2
• AAindex
• SCPRED
• iHyd-PseAAC
• PSNO
• LORIS
• iCDI-PseFpt
• SuccFind
• BLProt
• Prediction of Golgi-resident protein types using general form of Chou's pseudo-amino acid compositions: approaches with minimal redundancy maximal relevance feature selection
• Neural network and SVM classifiers accurately predict lipid binding proteins, irrespective of sequence homology
• Protein fold recognition by alignment of amino acid residues using kernelized dynamic time warping
• Predicting anticancer peptides with Chou's pseudo amino acid composition and investigating their mutagenicity via ames test
• Discrimination of acidic and alkaline enzyme using Chou's pseudo amino acid composition in conjunction with probabilistic neural network model
• Prediction of \(\beta\)-lactamase and its class by Chou's pseudo-amino acid composition and support vector machine
• Chou's pseudo amino acid composition improves sequence-based antifreeze protein prediction
• A set of descriptors for identifying the protein-drug interaction in cellular networking
• pLoc\_bal-mGneg: predict subcellular localization of Gram-negative bacterial proteins by quasi-balancing training dataset and general PseAAC
• iRNA-PseKNC(2methyl): identify RNA 2'-O-methylation sites by convolution neural network and Chou's pseudo components
• iPPI-PseAAC(CGR): identify protein-protein interactions by incorporating chaos game representation into PseAAC
• MFSC: multi-voting based feature selection for classification of Golgi proteins by adopting the general form of Chou's PseAAC components
• pSSbond-PseAAC: prediction of disulfide bonding sites by integration of PseAAC and statistical moments

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