AFP-Pred

swMATH22441MaRDI QIDQ34233FDOQ34233

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Official website: https://www.ncbi.nlm.nih.gov/pubmed/21056045

Cited In (47)

• Prediction of protein-protein interaction sites using patch-based residue characterization
• Prediction of interface residue based on the features of residue interaction network
• Comprehensive comparative analysis and identification of RNA-binding protein domains: multi-class classification and feature selection
• Identifying 5-methylcytosine sites in RNA sequence using composite encoding feature into Chou's PseKNC
• IMem-2LSAAC: a two-level model for discrimination of membrane proteins and their types by extending the notion of SAAC into Chou's pseudo amino acid composition
• Two-intermediate model to characterize the structure of fast-folding proteins
• A segmented principal component analysis -- regression approach to QSAR study of peptides
• RFCRYS: sequence-based protein crystallization propensity prediction by means of random forest
• Studies on the rules of \(\beta\)-strand alignment in a protein \(\beta\)-sheet structure
• A novel canonical dual computational approach for prion AGAAAAGA amyloid fibril molecular modeling
• HPAM
• wsrf
• AUTO-MUTE
• CRYSTALP2
• PISCES
• ParCrys
• Porter
• STITCH
• \textit{In vitro} transcriptomic prediction of hepatotoxicity for early drug discovery
• pSuc-Lys: predict lysine succinylation sites in proteins with PseAAC and ensemble random forest approach
• FreeSASA
• GPCR-2L
• iDNA-Prot
• GPCR-GIA
• iLoc-Euk
• Quat-2L
• RSARF
• SecretP
• DSPMP
• BacPP
• NR-2L
• EnsemblePail
• LORIS
• PSAIA
• FoldRate
• A feature extraction technique using bi-gram probabilities of position specific scoring matrix for protein fold recognition
• ASAView
• An extension of fuzzy topological approach for comparison of genetic sequences
• CE-PLoc: An ensemble classifier for predicting protein subcellular locations by fusing different modes of pseudo amino acid composition
• Sequence-dependent prediction of recombination hotspots in \textit{Saccharomyces cerevisiae}
• Chou's pseudo amino acid composition improves sequence-based antifreeze protein prediction
• pLoc\_bal-mGneg: predict subcellular localization of Gram-negative bacterial proteins by quasi-balancing training dataset and general PseAAC
• A similarity-based method for prediction of drug side effects with heterogeneous information
• BacPP: bacterial promoter prediction -- a tool for accurate sigma-factor specific assignment in enterobacteria
• Predicting mycobacterial proteins subcellular locations by incorporating pseudo-average chemical shift into the general form of Chou's pseudo amino acid composition
• Analysis and prediction of ion channel inhibitors by using feature selection and Chou's general pseudo amino acid composition
• iPPI-PseAAC(CGR): identify protein-protein interactions by incorporating chaos game representation into PseAAC

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