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swMATH22434MaRDI QIDQ34226FDOQ34226

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Official website: https://www.ncbi.nlm.nih.gov/pubmed/21483473

Cited In (97)

• \textit{SVM} ensemble based transfer learning for large-scale membrane proteins discrimination
• A new hybrid fractal algorithm for predicting thermophilic nucleotide sequences
• A segmented principal component analysis -- regression approach to QSAR study of peptides
• RFCRYS: sequence-based protein crystallization propensity prediction by means of random forest
• Studies on the rules of \(\beta\)-strand alignment in a protein \(\beta\)-sheet structure
• Discriminating bioluminescent proteins by incorporating average chemical shift and evolutionary information into the general form of Chou's pseudo amino acid composition
• Interrogating noise in protein sequences from the perspective of protein-protein interactions prediction
• Human proteins characterization with subcellular localizations
• Protein subcellular localization in human and hamster cell lines: employing local ternary patterns of fluorescence microscopy images
• MemHyb: predicting membrane protein types by hybridizing SAAC and PSSM
• Naïve Bayes classifier with feature selection to identify phage virion proteins
• Prediction of protein-protein interaction sites using patch-based residue characterization
• iCDI-PseFpt: identify the channel-drug interaction in cellular networking with PseAAC and molecular fingerprints
• Alignment free comparison: similarity distribution between the DNA primary sequences based on the shortest absent word
• Predicting protein subchloroplast locations with both single and multiple sites via three different modes of Chou's pseudo amino acid compositions
• Predicting plant protein subcellular multi-localization by Chou's PseAAC formulation based multi-label homolog knowledge transfer learning
• Elman RNN based classification of proteins sequences on account of their mutual information
• Annotating the protein-RNA interaction sites in proteins using evolutionary information and protein backbone structure
• Comprehensive comparative analysis and identification of RNA-binding protein domains: multi-class classification and feature selection
• Predicting Golgi-resident protein types using pseudo amino acid compositions: approaches with positional specific physicochemical properties
• BacHbpred
• An RNA secondary structure prediction method based on minimum and suboptimal free energy structures
• A novel canonical dual computational approach for prion AGAAAAGA amyloid fibril molecular modeling
• Cell-PLoc
• ProSOM
• BLAST
• Memtype-2L
• Nuc-ploc
• ProtIdent
• AUTO-MUTE
• Cd-hit
• CRYSTALP2
• PISCES
• ParCrys
• Porter
• BaCelLo
• RNAalifold
• PSI-BLAST
• N-SCAN
• TurboFold
• Classify vertebrate hemoglobin proteins by incorporating the evolutionary information into the general PseAAC with the hybrid approach
• AFP-Pred
• Euk-PLoc
• Identification of protein subcellular localization via integrating evolutionary and physicochemical information into Chou's general PseAAC
• GPCR-2L
• GOASVM
• iLoc-Virus
• iLoc-Gpos
• iLoc-Plant
• GPCR-GIA
• iLoc-Animal
• iLoc-Hum
• iEzy-drug
• iNuc-PhysChem
• MultiLoc2
• PseAAC-Builder
• Plant-mPLoc
• OligoPred
• Quat-2L
• SecretP
• SubChlo
• SubMito-PSPCP
• MemLoci
• MemHyb
• BacPP
• Gneg-mPLoc
• Gpos-mPLoc
• GPCR-CA
• AAindex
• Euk-mPLoc
• Hum-mPLoc
• Hum-PLoc
• iNR-PhysChem
• NR-2L
• uShuffle
• PSAIA
• iCDI-PseFpt
• CentroidAlifold
• PairProSVM
• MultiLoc
• MARNA
• PromoterExplorer
• ASAView
• BLProt
• Prediction of protein subcellular localization with oversampling approach and Chou's general PseAAC
• Multi-kernel transfer learning based on Chou's PseAAC formulation for protein submitochondria localization
• Prediction of Golgi-resident protein types using general form of Chou's pseudo-amino acid compositions: approaches with minimal redundancy maximal relevance feature selection
• CE-PLoc: An ensemble classifier for predicting protein subcellular locations by fusing different modes of pseudo amino acid composition
• Protein fold recognition by alignment of amino acid residues using kernelized dynamic time warping
• Sequence-dependent prediction of recombination hotspots in \textit{Saccharomyces cerevisiae}
• Prediction of \(\beta\)-lactamase and its class by Chou's pseudo-amino acid composition and support vector machine
• A two-stage SVM method to predict membrane protein types by incorporating amino acid classifications and physicochemical properties into a general form of Chou's PseAAC
• Predicting apoptosis protein subcellular localization by integrating auto-cross correlation and PSSM into Chou's PseAAC
• Predicting mycobacterial proteins subcellular locations by incorporating pseudo-average chemical shift into the general form of Chou's pseudo amino acid composition
• Analysis and prediction of ion channel inhibitors by using feature selection and Chou's general pseudo amino acid composition
• iMethyl-STTNC: identification of N\(^6\)-methyladenosine sites by extending the idea of SAAC into Chou's PseAAC to formulate RNA sequences
• Predicting promoters by pseudo-trinucleotide compositions based on discrete wavelets transform

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