Alignment free comparison: similarity distribution between the DNA primary sequences based on the shortest absent word
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Publication:285165
DOI10.1016/J.JTBI.2011.11.021zbMATH Open1336.92030OpenAlexW1994149784WikidataQ51483049 ScholiaQ51483049MaRDI QIDQ285165FDOQ285165
Authors: Lianping Yang, Hegui Zhu, Xiangde Zhang 
Publication date: 19 May 2016
Published in: Journal of Theoretical Biology (Search for Journal in Brave)
Full work available at URL: https://doi.org/10.1016/j.jtbi.2011.11.021
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Cites Work
- SubChlo: predicting protein subchloroplast locations with pseudo-amino acid composition and the evidence-theoretic \(K\)-nearest neighbor (ET-KNN) algorithm
- Predicting protein fold pattern with functional domain and sequential evolution information
- Protein functional class prediction using global encoding of amino acid sequence
- Some remarks on protein attribute prediction and pseudo amino acid composition
- Comparison of alignment free string distances for complete genome phylogeny
- Statistical measures of DNA sequence dissimilarity under Markov chain models of base composition
- A measure of the similarity of sets of sequences not requiring sequence alignment.
Cited In (6)
- Phylogenetic analysis of DNA sequences based on \(k\)-word and rough set theory
- Protein Sequence Comparison Method Based on 3-ary Huffman Coding
- Comparison of genomic data via statistical distribution
- Extraction of high quality \(k\)-words for alignment-free sequence comparison
- Efficient computation of shortest absent words in a genomic sequence
- Alignment free comparison: \(k\) word voting model and its applications
Uses Software
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