Predicting apoptosis protein subcellular localization by integrating auto-cross correlation and PSSM into Chou's PseAAC
From MaRDI portal
Publication:1712667
DOI10.1016/j.jtbi.2018.08.042zbMath1406.92230WikidataQ91282446 ScholiaQ91282446MaRDI QIDQ1712667
Publication date: 31 January 2019
Published in: Journal of Theoretical Biology (Search for Journal in Brave)
Full work available at URL: https://doi.org/10.1016/j.jtbi.2018.08.042
autocorrelation function; cross correlation; support vector machine; protein subcellular localization; PSSM
62P10: Applications of statistics to biology and medical sciences; meta analysis
68T05: Learning and adaptive systems in artificial intelligence
92C40: Biochemistry, molecular biology
92D20: Protein sequences, DNA sequences
92C37: Cell biology
Uses Software
- LIBSVM
- pSuc-Lys
- PISCES
- PSI-BLAST
- BLAST
- Pse-in-One
- iPro54-PseKNC
- iLoc-Euk
- PseKNC
- iRSpot-PseDNC
- iSS-PseDNC
- iNitro-Tyr
- iPTM-mLys
- iACP
- iOri-Human
- iRNA-AI
- pLoc-mAnimal
- pLoc-mVirus
- pLoc-mEuk
- iRNA-PseColl
- iRSpot-EL
- iPromoter-2L
- pLoc-mGneg
- pLoc-mPlant
- iHSP-PseRAAAC
- iRNA-3typeA
- pLoc-mHum
- iDNA6mA-PseKNC
- 2L-piRNA
- iEnhancer-EL
- iRO-3wPseKNC
- pLoc_bal-mGpos
- iRSpot-Pse6NC
- iLoc-lncRNA