pSuc-Lys

swMATH16643MaRDI QIDQ28512FDOQ28512

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Described by source

• pSuc-Lys: predict lysine succinylation sites in proteins with PseAAC and ensemble random forest approach

Cited In (30)

• Sequence-based discrimination of protein-RNA interacting residues using a probabilistic approach
• Identifying N\(^6\)-methyladenosine sites using extreme gradient boosting system optimized by particle swarm optimizer
• SPrenylC-PseAAC: a sequence-based model developed via Chou's 5-steps rule and general PseAAC for identifying S-prenylation sites in proteins
• Dforml(KNN)-PseAAC: detecting formylation sites from protein sequences using K-nearest neighbor algorithm via Chou's 5-step rule and pseudo components
• Prediction of interface residue based on the features of residue interaction network
• Bi-PSSM: position specific scoring matrix based intelligent computational model for identification of mycobacterial membrane proteins
• IMem-2LSAAC: a two-level model for discrimination of membrane proteins and their types by extending the notion of SAAC into Chou's pseudo amino acid composition
• Predicting membrane protein types by incorporating a novel feature set into Chou's general PseAAC
• Classify vertebrate hemoglobin proteins by incorporating the evolutionary information into the general PseAAC with the hybrid approach
• Characterization of BioPlex network by topological properties
• Convex hull analysis of evolutionary and phylogenetic relationships between biological groups
• Prediction of aptamer-protein interacting pairs based on sparse autoencoder feature extraction and an ensemble classifier
• Prediction of Golgi-resident protein types using general form of Chou's pseudo-amino acid compositions: approaches with minimal redundancy maximal relevance feature selection
• The preliminary efficacy evaluation of the CTLA-4-ig treatment against lupus nephritis through \textit{in-silico} analyses
• PSSM-Suc: accurately predicting succinylation using position specific scoring matrix into bigram for feature extraction
• Prediction of metastasis in advanced colorectal carcinomas using CGH data
• NucPosPred: predicting species-specific genomic nucleosome positioning via four different modes of general PseKNC
• BlaPred: predicting and classifying \(\beta\)-lactamase using a 3-tier prediction system via Chou's general PseAAC
• pLoc\_bal-mGneg: predict subcellular localization of Gram-negative bacterial proteins by quasi-balancing training dataset and general PseAAC
• iRNA-PseKNC(2methyl): identify RNA 2'-O-methylation sites by convolution neural network and Chou's pseudo components
• Prediction of S-sulfenylation sites using mRMR feature selection and fuzzy support vector machine algorithm
• Predicting apoptosis protein subcellular localization by integrating auto-cross correlation and PSSM into Chou's PseAAC
• Fu-SulfPred: identification of protein S-sulfenylation sites by fusing forests via Chou's general PseAAC
• Analysis and prediction of ion channel inhibitors by using feature selection and Chou's general pseudo amino acid composition
• Effective DNA binding protein prediction by using key features via Chou's general PseAAC
• \textit{In silico} analysis of \textit{plasmodium falciparum} CDPK5 protein through molecular modeling, docking and dynamics
• iPPI-PseAAC(CGR): identify protein-protein interactions by incorporating chaos game representation into PseAAC
• MFSC: multi-voting based feature selection for classification of Golgi proteins by adopting the general form of Chou's PseAAC components
• Analysis and prediction of animal toxins by various Chou's pseudo components and reduced amino acid compositions
• pSSbond-PseAAC: prediction of disulfide bonding sites by integration of PseAAC and statistical moments

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