PseKNC

swMATH22436MaRDI QIDQ34228FDOQ34228

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Cited In (31)

• Dforml(KNN)-PseAAC: detecting formylation sites from protein sequences using K-nearest neighbor algorithm via Chou's 5-step rule and pseudo components
• Predicting Golgi-resident protein types using pseudo amino acid compositions: approaches with positional specific physicochemical properties
• Comparison of genomic data via statistical distribution
• Identifying 5-methylcytosine sites in RNA sequence using composite encoding feature into Chou's PseKNC
• Predicting membrane protein types by incorporating a novel feature set into Chou's general PseAAC
• iLM-2L: a two-level predictor for identifying protein lysine methylation sites and their methylation degrees by incorporating K-gap amino acid pairs into Chou's general PseAAC
• Using weighted features to predict recombination hotspots in \textit{Saccharomyces cerevisiae}
• Classification of membrane protein types using voting feature interval in combination with Chou's pseudo amino acid composition
• Analysis on the preference for sequence matching between mRNA sequences and the corresponding introns in ribosomal protein genes
• Identify Gram-negative bacterial secreted protein types by incorporating different modes of PSSM into Chou's general PseAAC via Kullback-Leibler divergence
• pSuc-Lys: predict lysine succinylation sites in proteins with PseAAC and ensemble random forest approach
• Predicting structural classes of proteins by incorporating their global and local physicochemical and conformational properties into general Chou's PseAAC
• Prediction of protein subcellular localization with oversampling approach and Chou's general PseAAC
• Prediction of Golgi-resident protein types using general form of Chou's pseudo-amino acid compositions: approaches with minimal redundancy maximal relevance feature selection
• Discrimination of acidic and alkaline enzyme using Chou's pseudo amino acid composition in conjunction with probabilistic neural network model
• fabp4 is central to eight obesity associated genes: a functional gene network-based polymorphic study
• NucPosPred: predicting species-specific genomic nucleosome positioning via four different modes of general PseKNC
• BlaPred: predicting and classifying \(\beta\)-lactamase using a 3-tier prediction system via Chou's general PseAAC
• pLoc\_bal-mGneg: predict subcellular localization of Gram-negative bacterial proteins by quasi-balancing training dataset and general PseAAC
• iRNA-PseKNC(2methyl): identify RNA 2'-O-methylation sites by convolution neural network and Chou's pseudo components
• Predicting protein-protein interactions by fusing various Chou's pseudo components and using wavelet denoising approach
• Predicting protein sub-Golgi locations by combining functional domain enrichment scores with pseudo-amino acid compositions
• Predicting apoptosis protein subcellular localization by integrating auto-cross correlation and PSSM into Chou's PseAAC
• Communities in the iron superoxide dismutase amino acid network
• Analysis and prediction of ion channel inhibitors by using feature selection and Chou's general pseudo amino acid composition
• iMethyl-STTNC: identification of N\(^6\)-methyladenosine sites by extending the idea of SAAC into Chou's PseAAC to formulate RNA sequences
• Effective DNA binding protein prediction by using key features via Chou's general PseAAC
• iPPI-PseAAC(CGR): identify protein-protein interactions by incorporating chaos game representation into PseAAC
• Analysis and prediction of animal toxins by various Chou's pseudo components and reduced amino acid compositions
• Distribution bias of the sequence matching between exons and introns in exon joint and EJC binding region in \textit{C. elegans}
• iPHLoc-ES: identification of bacteriophage protein locations using evolutionary and structural features

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