Distribution bias of the sequence matching between exons and introns in exon joint and EJC binding region in \textit{C. elegans}

DOI10.1016/j.jtbi.2014.09.009zbMath1405.92223OpenAlexW2048014357WikidataQ45113584 ScholiaQ45113584MaRDI QIDQ2413932

Yan Zheng, Xiaoqing Zhao, Deliang Zhou, Qiang Zhang, Hong Li

Publication date: 17 September 2018

Published in: Journal of Theoretical Biology (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.jtbi.2014.09.009

zbMATH Keywords

intronslocal matched alignmentoptimal matched segmentsEJCexon-exon sequences

Mathematics Subject Classification ID

Protein sequences, DNA sequences (92D20)

Related Items (2)

Analysis on the preference for sequence matching between mRNA sequences and the corresponding introns in ribosomal protein genes ⋮ Potential relations between post-spliced introns and mature mRNAs in the \textit{Caenorhabditis elegans} genome

Uses Software

• iNuc-PseKNC
• iRSpot-TNCPseAAC
• PseKNC
• iRSpot-PseDNC
• iCTX-Type
• iMethyl-PseAAC
• iHyd-PseAAC

Cites Work

• Some remarks on protein attribute prediction and pseudo amino acid composition
• On Information and Sufficiency

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