iRSpot-PseDNC

swMATH22437MaRDI QIDQ34229FDOQ34229

Author name not available (Why is that?)

Cited In (65)

• Efficacy of function specific 3D-motifs in enzyme classification according to their EC-numbers
• fabp4 is central to eight obesity associated genes: a functional gene network-based polymorphic study
• Constructing a linear QSAR for some metabolizable drugs by human or pig flavin-containing monooxygenases using some molecular features selected by a genetic algorithm trained SVM
• A set of descriptors for identifying the protein-drug interaction in cellular networking
• A new technique for generating pathogenic barcodes in breast cancer susceptibility analysis
• Human proteins characterization with subcellular localizations
• Prediction of the determinants of thermal stability by linear discriminant analysis: the case of the glutamate dehydrogenase protein family
• Protein subcellular localization in human and hamster cell lines: employing local ternary patterns of fluorescence microscopy images
• Predicting protein sub-Golgi locations by combining functional domain enrichment scores with pseudo-amino acid compositions
• Sequence-based discrimination of protein-RNA interacting residues using a probabilistic approach
• Identifying N\(^6\)-methyladenosine sites using extreme gradient boosting system optimized by particle swarm optimizer
• Dforml(KNN)-PseAAC: detecting formylation sites from protein sequences using K-nearest neighbor algorithm via Chou's 5-step rule and pseudo components
• Naïve Bayes classifier with feature selection to identify phage virion proteins
• VR-BFDT: a variance reduction based binary fuzzy decision tree induction method for protein function prediction
• iCDI-PseFpt: identify the channel-drug interaction in cellular networking with PseAAC and molecular fingerprints
• A two-layer classification framework for protein fold recognition
• A Hooke's law-based approach to protein folding rate
• Predicting protein submitochondrial locations by incorporating the pseudo-position specific scoring matrix into the general Chou's pseudo-amino acid composition
• Predicting protein subchloroplast locations with both single and multiple sites via three different modes of Chou's pseudo amino acid compositions
• Predicting Golgi-resident protein types using pseudo amino acid compositions: approaches with positional specific physicochemical properties
• An estimator for local analysis of genome based on the minimal absent word
• Comparison of genomic data via statistical distribution
• Highly accurate prediction of protein self-interactions by incorporating the average block and PSSM information into the general PseAAC
• iLM-2L: a two-level predictor for identifying protein lysine methylation sites and their methylation degrees by incorporating K-gap amino acid pairs into Chou's general PseAAC
• Prediction of protein structure classes by incorporating different protein descriptors into general Chou's pseudo amino acid composition
• Using weighted features to predict recombination hotspots in \textit{Saccharomyces cerevisiae}
• Classification of membrane protein types using voting feature interval in combination with Chou's pseudo amino acid composition
• Analysis on the preference for sequence matching between mRNA sequences and the corresponding introns in ribosomal protein genes
• Identify Gram-negative bacterial secreted protein types by incorporating different modes of PSSM into Chou's general PseAAC via Kullback-Leibler divergence
• Analysis of codon use features of stearoyl-acyl carrier protein desaturase gene in \textit{Camellia sinensis}
• Discriminating bioluminescent proteins by incorporating average chemical shift and evolutionary information into the general form of Chou's pseudo amino acid composition
• Classify vertebrate hemoglobin proteins by incorporating the evolutionary information into the general PseAAC with the hybrid approach
• Precision assessment of some supervised and unsupervised algorithms for genotype discrimination in the genus \textit{pisum} using SSR molecular data
• pSuc-Lys: predict lysine succinylation sites in proteins with PseAAC and ensemble random forest approach
• Predicting structural classes of proteins by incorporating their global and local physicochemical and conformational properties into general Chou's PseAAC
• An effective haplotype assembly algorithm based on hypergraph partitioning
• Alignment free comparison: \(k\) word voting model and its applications
• Prediction of Golgi-resident protein types using general form of Chou's pseudo-amino acid compositions: approaches with minimal redundancy maximal relevance feature selection
• Discriminate protein decoys from native by using a scoring function based on ubiquitous phi and psi angles computed for all atom
• Neural network and SVM classifiers accurately predict lipid binding proteins, irrespective of sequence homology
• Protein fold recognition by alignment of amino acid residues using kernelized dynamic time warping
• Predicting DNA binding proteins using support vector machine with hybrid fractal features
• Predicting anticancer peptides with Chou's pseudo amino acid composition and investigating their mutagenicity via ames test
• Chou's pseudo amino acid composition improves sequence-based antifreeze protein prediction
• Gram-positive and Gram-negative protein subcellular localization by incorporating evolutionary-based descriptors into Chou's general PseAAC
• A two-stage SVM method to predict membrane protein types by incorporating amino acid classifications and physicochemical properties into a general form of Chou's PseAAC
• Prediction of metastasis in advanced colorectal carcinomas using CGH data
• Novel 3D bio-macromolecular bilinear descriptors for protein science: predicting protein structural classes
• RBSURFpred: modeling protein accessible surface area in real and binary space using regularized and optimized regression
• NucPosPred: predicting species-specific genomic nucleosome positioning via four different modes of general PseKNC
• BlaPred: predicting and classifying \(\beta\)-lactamase using a 3-tier prediction system via Chou's general PseAAC
• pLoc\_bal-mGneg: predict subcellular localization of Gram-negative bacterial proteins by quasi-balancing training dataset and general PseAAC
• iRNA-PseKNC(2methyl): identify RNA 2'-O-methylation sites by convolution neural network and Chou's pseudo components
• Predicting protein-protein interactions by fusing various Chou's pseudo components and using wavelet denoising approach
• Predicting apoptosis protein subcellular localization by integrating auto-cross correlation and PSSM into Chou's PseAAC
• Fu-SulfPred: identification of protein S-sulfenylation sites by fusing forests via Chou's general PseAAC
• Analysis and prediction of ion channel inhibitors by using feature selection and Chou's general pseudo amino acid composition
• Prediction of success for polymerase chain reactions using the Markov maximal order model and support vector machine
• Effective DNA binding protein prediction by using key features via Chou's general PseAAC
• iPPI-PseAAC(CGR): identify protein-protein interactions by incorporating chaos game representation into PseAAC
• MFSC: multi-voting based feature selection for classification of Golgi proteins by adopting the general form of Chou's PseAAC components
• Prediction and functional analysis of prokaryote lysine acetylation site by incorporating six types of features into Chou's general PseAAC
• Analysis and prediction of animal toxins by various Chou's pseudo components and reduced amino acid compositions
• pSSbond-PseAAC: prediction of disulfide bonding sites by integration of PseAAC and statistical moments
• Distribution bias of the sequence matching between exons and introns in exon joint and EJC binding region in \textit{C. elegans}

This page was built for software: iRSpot-PseDNC