swMATH16472MaRDI QIDQ28342FDOQ28342
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Official website: http://www.csbio.sjtu.edu.cn/bioinf/MemType/
Cited In (92)
- Molecular modeling of BAD complex resided in a mitochondrion integrating glycolysis and apoptosis
- Bi-PSSM: position specific scoring matrix based intelligent computational model for identification of mycobacterial membrane proteins
- Prediction of antioxidant proteins by incorporating statistical moments based features into Chou's PseAAC
- Comparative genomics study of \textit{Salmonella Typhimurium} LT2 for the identification of putative therapeutic candidates
- MFSC: multi-voting based feature selection for classification of Golgi proteins by adopting the general form of Chou's PseAAC components
- A simple method to analyze the similarity of biological sequences based on the fuzzy theory
- Protein classification using texture descriptors extracted from the protein backbone image
- MemHyb: predicting membrane protein types by hybridizing SAAC and PSSM
- A study of entropy/clarity of genetic sequences using metric spaces and fuzzy sets
- NL MIND-BEST: a web server for ligands and proteins discovery -- theoretic-experimental study of proteins of \textit{Giardia lamblia} and new compounds active against \textit{Plasmodium falciparum}
- Alignment free comparison: similarity distribution between the DNA primary sequences based on the shortest absent word
- \(\gamma\)-turn types prediction in proteins using the two-stage hybrid neural discriminant model
- Predicting protein submitochondrial locations by incorporating the pseudo-position specific scoring matrix into the general Chou's pseudo-amino acid composition
- Predicting protein subchloroplast locations with both single and multiple sites via three different modes of Chou's pseudo amino acid compositions
- Geometry preserving projections algorithm for predicting membrane protein types
- Prediction of protein structural classes by recurrence quantification analysis based on chaos game representation
- Annotating the protein-RNA interaction sites in proteins using evolutionary information and protein backbone structure
- IMem-2LSAAC: a two-level model for discrimination of membrane proteins and their types by extending the notion of SAAC into Chou's pseudo amino acid composition
- Predicting membrane protein types by incorporating a novel feature set into Chou's general PseAAC
- Classification of membrane protein types using voting feature interval in combination with Chou's pseudo amino acid composition
- Some remarks on protein attribute prediction and pseudo amino acid composition
- Cell-PLoc
- TMB-Hunt
- Nuc-ploc
- PseAAC
- ProtIdent
- Porter
- PROFEAT
- PredGPI
- Use of fuzzy clustering technique and matrices to classify amino acids and its impact to Chou's pseudo amino acid composition
- HyperChem
- Euk-PLoc
- GPCR-2L
- iLoc-Gpos
- GPCR-GIA
- iLoc-Hum
- iLoc-Euk
- GPCRpred
- Plant-mPLoc
- Quat-2L
- QuatIdent
- SecretP
- Virus-ploc
- VGIchan
- iRSpot-GAEnsC
- MemHyb
- NRPSpredictor2
- Gneg-mPLoc
- Gpos-mPLoc
- GPCR-CA
- NL MIND-BEST
- AAindex
- Euk-mPLoc
- EzyPred
- Gpos-PLoc
- GNBSL
- HIVcleave
- Hum-mPLoc
- Hum-PLoc
- KNOTTIN
- MITOPRED
- PROMOTIF
- Signal-CF
- Signal-3L
- Bio-AIMS
- EpitopeViewer
- VaxiJen
- MARCH-INSIDE
- OCTOPUS
- RNAlign
- FoldRate
- MultiLoc
- VirulentPred
- Predicting DNA- and RNA-binding proteins from sequences with kernel methods
- Using the augmented Chou's pseudo amino acid composition for predicting protein submitochondria locations based on auto covariance approach
- Using the concept of Chou's pseudo amino acid composition for risk type prediction of human papillomaviruses
- The modified Mahalanobis discriminant for predicting outer membrane proteins by using Chou's pseudo amino acid composition
- Predicting membrane protein types by incorporating protein topology, domains, signal peptides, and physicochemical properties into the general form of Chou's pseudo amino acid composition
- pSLIP
- GenThreader
- High performance set of PseAAC and sequence based descriptors for protein classification
- The Burrows-Wheeler similarity distribution between biological sequences based on Burrows-Wheeler transform
- Protein fold recognition by alignment of amino acid residues using kernelized dynamic time warping
- Predicting ion channels and their types by the dipeptide mode of pseudo amino acid composition
- Application of density similarities to predict membrane protein types based on pseudo-amino acid composition
- A two-stage SVM method to predict membrane protein types by incorporating amino acid classifications and physicochemical properties into a general form of Chou's PseAAC
- Prediction of metastasis in advanced colorectal carcinomas using CGH data
- pLoc\_bal-mGneg: predict subcellular localization of Gram-negative bacterial proteins by quasi-balancing training dataset and general PseAAC
- Multiclass cancer classification by support vector machines with class-wise optimized genes and probability estimates
- A protein fold classifier formed by fusing different modes of pseudo amino acid composition via PSSM
- Predicting mycobacterial proteins subcellular locations by incorporating pseudo-average chemical shift into the general form of Chou's pseudo amino acid composition
- Prediction protein structural classes with pseudo-amino acid composition: approximate entropy and hydrophobicity pattern
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