Protein fold recognition by alignment of amino acid residues using kernelized dynamic time warping
From MaRDI portal
Publication:2415541
Recommendations
- A feature extraction technique using bi-gram probabilities of position specific scoring matrix for protein fold recognition
- Protein classification using texture descriptors extracted from the protein backbone image
- scientific article; zbMATH DE number 1832360
- scientific article; zbMATH DE number 2033264
- Research in Computational Molecular Biology
Cites work
- \textbf{iLoc-Virus}: a multi-label learning classifier for identifying the subcellular localization of virus proteins with both single and multiple sites
- A feature extraction technique using bi-gram probabilities of position specific scoring matrix for protein fold recognition
- A new perspective to null linear discriminant analysis method and its fast implementation using random matrix multiplication with scatter matrices
- A novel feature representation method based on Chou's pseudo amino acid composition for protein structural class prediction
- A protein fold classifier formed by fusing different modes of pseudo amino acid composition via PSSM
- Class-dependent PCA, MDC and LDA: a combined classifier for pattern classification
- scientific article; zbMATH DE number 823069 (Why is no real title available?)
- iCDI-PseFpt: identify the channel-drug interaction in cellular networking with PseAAC and molecular fingerprints
- Pattern recognition and machine learning.
- Predicting anticancer peptides with Chou's pseudo amino acid composition and investigating their mutagenicity via ames test
- Prediction of GABA\(_{\mathrm A}\) receptor proteins using the concept of Chou's pseudo-amino acid composition and support vector machine
- Prediction of structural classes for protein sequences and domains--impact of prediction algorithms, sequence representation and homology, and test procedures on accuracy
- Prediction protein structural classes with pseudo-amino acid composition: approximate entropy and hydrophobicity pattern
- Some remarks on protein attribute prediction and pseudo amino acid composition
- Using the concept of Chou's pseudo amino acid composition for risk type prediction of human papillomaviruses
Cited in
(11)- Precision assessment of some supervised and unsupervised algorithms for genotype discrimination in the genus \textit{pisum} using SSR molecular data
- High performance set of PseAAC and sequence based descriptors for protein classification
- An efficient technique for superfamily classification of amino acid sequences: feature extraction, fuzzy clustering and prototype selection
- A two-layer classification framework for protein fold recognition
- Gram-positive and Gram-negative protein subcellular localization by incorporating evolutionary-based descriptors into Chou's general PseAAC
- A time series representation of protein sequences for similarity comparison
- scientific article; zbMATH DE number 1832360 (Why is no real title available?)
- Recognition of Protein Interaction Regions Through Time-Frequency Analysis
- Research in Computational Molecular Biology
- Calibrating the classifier for protein family prediction with protein sequence using machine learning techniques: An empirical investigation
- Weighted dynamic time warping for time series
Describes a project that uses
Uses Software
This page was built for publication: Protein fold recognition by alignment of amino acid residues using kernelized dynamic time warping
Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q2415541)