Protein fold recognition by alignment of amino acid residues using kernelized dynamic time warping
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Publication:2415541
DOI10.1016/j.jtbi.2014.03.033zbMath1412.92248OpenAlexW2120761436WikidataQ53582752 ScholiaQ53582752MaRDI QIDQ2415541
Neela Biswas, Kuldip K. Paliwal, Alok Sharma, Abdollah Dehzangi, J. E. Lyons
Publication date: 23 May 2019
Published in: Journal of Theoretical Biology (Search for Journal in Brave)
Full work available at URL: http://hdl.handle.net/10072/66715
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Cites Work
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- A new perspective to null linear discriminant analysis method and its fast implementation using random matrix multiplication with scatter matrices
- Prediction of structural classes for protein sequences and domains--impact of prediction algorithms, sequence representation and homology, and test procedures on accuracy
- A novel feature representation method based on Chou's pseudo amino acid composition for protein structural class prediction
- A protein fold classifier formed by fusing different modes of pseudo amino acid composition via PSSM
- Some remarks on protein attribute prediction and pseudo amino acid composition
- A feature extraction technique using bi-gram probabilities of position specific scoring matrix for protein fold recognition
- Using the concept of Chou's pseudo amino acid composition for risk type prediction of human papillomaviruses
- Prediction of GABA\(_{\mathrm A}\) receptor proteins using the concept of Chou's pseudo-amino acid composition and support vector machine
- \textbf{iLoc-Virus}: a multi-label learning classifier for identifying the subcellular localization of virus proteins with both single and multiple sites
- Prediction protein structural classes with pseudo-amino acid composition: approximate entropy and hydrophobicity pattern
- Class-dependent PCA, MDC and LDA: a combined classifier for pattern classification
- iCDI-PseFpt: identify the channel-drug interaction in cellular networking with PseAAC and molecular fingerprints
- Predicting anticancer peptides with Chou's pseudo amino acid composition and investigating their mutagenicity via ames test