Prediction of structural classes for protein sequences and domains--impact of prediction algorithms, sequence representation and homology, and test procedures on accuracy

DOI10.1016/j.patcog.2006.02.014zbMath1103.68767OpenAlexW2105634619WikidataQ56993507 ScholiaQ56993507MaRDI QIDQ850136

Lukasz A. Kurgan, Leila Homaeian

Publication date: 15 November 2006

Published in: Pattern Recognition (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.patcog.2006.02.014

zbMATH Keywords

predictionhomologymachine learningprotein structural classSCOPsecondary protein structure

Mathematics Subject Classification ID

Learning and adaptive systems in artificial intelligence (68T05) Pattern recognition, speech recognition (68T10)

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Uses Software

• C4.5

Cites Work

• Wrappers for feature subset selection
• Support vector machines for prediction of protein domain structural class
• Improvements to Platt's SMO Algorithm for SVM Classifier Design
• Ridge Estimators in Logistic Regression
• Support Vector Machines for Protein Fold Class Prediction
• Approximation, dimension reduction, and nonconvex optimization using linear superpositions of Gaussians
• Random forests