Improving the prediction accuracy of protein structural class: approached with alternating word frequency and normalized Lempel-Ziv complexity
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Publication:2632396
DOI10.1016/J.JTBI.2013.10.002zbMath1411.92241OpenAlexW2029759111WikidataQ30354727 ScholiaQ30354727MaRDI QIDQ2632396
Xiguo Yuan, Yunyun Liang, Sheng-Li Zhang
Publication date: 14 May 2019
Published in: Journal of Theoretical Biology (Search for Journal in Brave)
Full work available at URL: https://doi.org/10.1016/j.jtbi.2013.10.002
Protein sequences, DNA sequences (92D20) Complexity classes (hierarchies, relations among complexity classes, etc.) (68Q15)
Uses Software
Cites Work
- Prediction of structural classes for protein sequences and domains--impact of prediction algorithms, sequence representation and homology, and test procedures on accuracy
- A comment on ``Prediction of protein structural classes by a new measure of information discrepancy
- Normalized Lempel-Ziv complexity and its application in bio-sequence analysis
- Prediction of protein structural classes by recurrence quantification analysis based on chaos game representation
- Some remarks on protein attribute prediction and pseudo amino acid composition
- A feature extraction technique using bi-gram probabilities of position specific scoring matrix for protein fold recognition
- A high-accuracy protein structural class prediction algorithm using predicted secondary structural information
- Prediction protein structural classes with pseudo-amino acid composition: approximate entropy and hydrophobicity pattern
- Using LogitBoost classifier to predict protein structural classes
- Using pseudo-amino acid composition and support vector machine to predict protein structural class
- On the Complexity of Finite Sequences
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