Using pseudo-amino acid composition and support vector machine to predict protein structural class
From MaRDI portal
Publication:2202397
DOI10.1016/J.JTBI.2006.06.025zbMath1447.92300OpenAlexW1998354148WikidataQ34557096 ScholiaQ34557096MaRDI QIDQ2202397
Pei-Xiang Cai, Xiao-Yong Zou, Chao Chen, Jin-Yuan Mo, Yuan-Xin Tian
Publication date: 18 September 2020
Published in: Journal of Theoretical Biology (Search for Journal in Brave)
Full work available at URL: https://doi.org/10.1016/j.jtbi.2006.06.025
Protein sequences, DNA sequences (92D20) Computational methods for problems pertaining to biology (92-08)
Related Items (17)
Use of fuzzy clustering technique and matrices to classify amino acids and its impact to Chou's pseudo amino acid composition ⋮ Prediction of protein structural classes by recurrence quantification analysis based on chaos game representation ⋮ Novel 3D bio-macromolecular bilinear descriptors for protein science: predicting protein structural classes ⋮ Improving the prediction accuracy of protein structural class: approached with alternating word frequency and normalized Lempel-Ziv complexity ⋮ A protein structural classes prediction method based on PSI-BLAST profile ⋮ Using protein granularity to extract the protein sequence features ⋮ Some remarks on protein attribute prediction and pseudo amino acid composition ⋮ Novel scales based on hydrophobicity indices for secondary protein structure ⋮ Using Chou's amphiphilic pseudo-amino acid composition and support vector machine for prediction of enzyme subfamily classes ⋮ Predicting structural classes of proteins by incorporating their global and local physicochemical and conformational properties into general Chou's PseAAC ⋮ Predicting membrane protein types by incorporating protein topology, domains, signal peptides, and physicochemical properties into the general form of Chou's pseudo amino acid composition ⋮ \(\gamma\)-Turn types prediction in proteins using the support vector machines ⋮ A study of entropy/clarity of genetic sequences using metric spaces and fuzzy sets ⋮ Prediction protein structural classes with pseudo-amino acid composition: approximate entropy and hydrophobicity pattern ⋮ The modified Mahalanobis discriminant for predicting outer membrane proteins by using Chou's pseudo amino acid composition ⋮ Predicting protein structural class based on multi-features fusion ⋮ Predicting protein structural classes with pseudo amino acid composition: an approach using geometric moments of cellular automaton image
Uses Software
Cites Work
This page was built for publication: Using pseudo-amino acid composition and support vector machine to predict protein structural class
