A protein structural classes prediction method based on PSI-BLAST profile
DOI10.1016/J.JTBI.2014.02.034zbMATH Open1412.92240OpenAlexW2020117329WikidataQ45897950 ScholiaQ45897950MaRDI QIDQ2632866FDOQ2632866
Authors: Shuyan Ding, Shoujiang Yan, Shuhua Qi, Yan Li, Yuhua Yao 
Publication date: 15 May 2019
Published in: Journal of Theoretical Biology (Search for Journal in Brave)
Full work available at URL: https://doi.org/10.1016/j.jtbi.2014.02.034
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Protein sequences, DNA sequences (92D20) Computational methods for problems pertaining to biology (92-08)
Cites Work
- iCDI-PseFpt: identify the channel-drug interaction in cellular networking with PseAAC and molecular fingerprints
- Some remarks on protein attribute prediction and pseudo amino acid composition
- A novel feature representation method based on Chou's pseudo amino acid composition for protein structural class prediction
- Predicting protein structural classes with pseudo amino acid composition: an approach using geometric moments of cellular automaton image
- Prediction protein structural classes with pseudo-amino acid composition: approximate entropy and hydrophobicity pattern
- Prediction of structural classes for protein sequences and domains--impact of prediction algorithms, sequence representation and homology, and test procedures on accuracy
- Using pseudo-amino acid composition and support vector machine to predict protein structural class
Cited In (13)
- Title not available (Why is that?)
- SVM-based detection of distant protein structural relationships using pairwise probabilistic suffix trees
- New methods for the prediction and classification of protein domains.
- Predicting protein structural class based on multi-features fusion
- Prediction of protein structural classes by recurrence quantification analysis based on chaos game representation
- Improving the prediction accuracy of protein structural class: approached with alternating word frequency and normalized Lempel-Ziv complexity
- Prediction of structural classes for protein sequences and domains--impact of prediction algorithms, sequence representation and homology, and test procedures on accuracy
- Prediction of protein structural class based on different autocorrelation descriptors of position-specific scoring matrix
- A high-accuracy protein structural class prediction algorithm using predicted secondary structural information
- Prediction of protein subcellular localization with oversampling approach and Chou's general PseAAC
- Detrended cross-correlation coefficient: application to predict apoptosis protein subcellular localization
- Accurate prediction of protein structural classes by incorporating predicted secondary structure information into the general form of Chou's pseudo amino acid composition
- Prediction of protein structure classes using hybrid space of multi-profile Bayes and bi-gram probability feature spaces
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