Support vector machines for prediction of protein domain structural class

DOI10.1006/JTBI.2003.3179MaRDI QIDQ2177101zbMATH OpenOpenAlexWikidataFDO

Authors Yanyan Li

Publication date 6 May 2020

Published in Journal of Theoretical Biology (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1006/jtbi.2003.3179

Mathematics Subject Classification ID

Learning and adaptive systems in artificial intelligence (68T05) Protein sequences, DNA sequences (92D20)

Recommendations

• Protein function classification via support vector machine approach
• Support vector machine for predicting protein interactions using domain scores
• Support vector machines for protein fold class prediction
• Using pseudo-amino acid composition and support vector machine to predict protein structural class
• A high-accuracy protein structural class prediction algorithm using predicted secondary structural information

Cites work

• scientific article; zbMATH DE number 1332320 (Why is no real title available?)
• scientific article; zbMATH DE number 823069 (Why is no real title available?)
• Support-vector networks

Cited in

(14)

• Support vector machines for learning to identify the critical positions of a protein
• New methods for the prediction and classification of protein domains.
• Support vector machine for predicting protein interactions using domain scores
• Anti-parallel Coiled Coils Structure Prediction by Support Vector Machine Classification
• Prediction of Carbohydrate-Binding Proteins from Sequences Using Support Vector Machines
• Prediction of structural classes for protein sequences and domains--impact of prediction algorithms, sequence representation and homology, and test procedures on accuracy
• Protein function classification via support vector machine approach
• Rule extraction from SVM for protein structure prediction
• Using the augmented Chou's pseudo amino acid composition for predicting protein submitochondria locations based on auto covariance approach
• Cooperativity of the oxidization of cysteines in globular proteins
• Using LogitBoost classifier to predict protein structural classes
• Predicting regions prone to protein aggregation based on SVM algorithm
• Support vector machines for protein fold class prediction
• On classification of PDZ domains: a computational study

Describes a project that uses

Uses Software

• SVMlight

This page was built for publication: Support vector machines for prediction of protein domain structural class

Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q2177101)