Prediction of Carbohydrate-Binding Proteins from Sequences Using Support Vector Machines

DOI10.1155/2010/289301MaRDI QIDQ3002736zbMATH OpenOpenAlexWikidataFDO

Authors Seizi Someya, Masanori Kakuta, Mizuki Morita, Kazuya Sumikoshi, Wei Cao, Zhenyi Ge, Osamu Hirose, Shugo Nakamura, Tohru Terada, Kentaro Shimizu

Publication date 24 May 2011

Published in Advances in Bioinformatics (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1155/2010/289301

Mathematics Subject Classification ID

Learning and adaptive systems in artificial intelligence (68T05) Biochemistry, molecular biology (92C40) Computational methods for problems pertaining to biology (92-08)

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Cited in

(6)

• Ligand-binding prediction in the resistance-nodulation-cell division (RND) proteins
• Population-based incremental learning for the prediction of Homo sapiens' protein secondary structure
• Prediction of \(N\)-linked glycan branching patterns using artificial neural networks
• Support vector machines for learning to identify the critical positions of a protein
• Carbohydrate-protein interactions: advances and challenges
• On using physico-chemical properties of amino acids in string kernels for protein classification via support vector machines

Describes a project that uses

Uses Software

• UniProt
• BLAST
• PSI-BLAST
• ClustalW

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