Variable predictive model based classification algorithm for effective separation of protein structural classes

DOI10.1016/J.COMPBIOLCHEM.2008.03.009zbMATH Open1158.62081DBLPjournals/candc/RaghurajL08OpenAlexW2005381724WikidataQ30369308 ScholiaQ30369308MaRDI QIDQ1004941FDOQ1004941

Authors: Rao Raghuraj, Samavedham Lakshminarayanan 

Publication date: 12 March 2009

Published in: Computational Biology and Chemistry (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.compbiolchem.2008.03.009

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zbMATH Keywords

discriminant analysiscomputational biologyprotein classificationsecondary structure predictionvariable predictive model

Mathematics Subject Classification ID

Classification and discrimination; cluster analysis (statistical aspects) (62H30) Applications of statistics to biology and medical sciences; meta analysis (62P10) Biochemistry, molecular biology (92C40)

Cites Work

• Title not available (Why is that?)
• Role and results of statistical methods in protein fold class prediction
• Prediction of structural classes for protein sequences and domains--impact of prediction algorithms, sequence representation and homology, and test procedures on accuracy

Cited In (6)

• Variable predictive models-a new multivariate classification approach for pattern recognition applications
• An association multi-classification algorithm based on the secondary structure sequence of proteins
• A novel feature representation method based on Chou's pseudo amino acid composition for protein structural class prediction
• On classification of PDZ domains: a computational study
• A high-accuracy protein structural class prediction algorithm using predicted secondary structural information
• Solving large protein secondary structure classification problems by a nonlinear complementarity algorithm with {0, 1} variables

Uses Software

• Matlab

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