Cell-PLoc

swMATH9126MaRDI QIDQ21119FDOQ21119

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Cited In (82)

• A study of entropy/clarity of genetic sequences using metric spaces and fuzzy sets
• NL MIND-BEST: a web server for ligands and proteins discovery -- theoretic-experimental study of proteins of \textit{Giardia lamblia} and new compounds active against \textit{Plasmodium falciparum}
• Phylogenetic analysis of DNA sequences based on the generalized pseudo-amino acid composition
• Naïve Bayes classifier with feature selection to identify phage virion proteins
• iCDI-PseFpt: identify the channel-drug interaction in cellular networking with PseAAC and molecular fingerprints
• Alignment-free prediction of mycobacterial DNA promoters based on pseudo-folding lattice network or star-graph topological indices
• Physics and chemistry-driven artificial neural network for predicting bioactivity of peptides and proteins and their design
• Donut-shaped fingerprint in homologous polypeptide relationships -- a topological feature related to pathogenic structural changes in conformational disease
• \(\gamma\)-turn types prediction in proteins using the two-stage hybrid neural discriminant model
• A network-QSAR model for prediction of genetic-component biomarkers in human colorectal cancer
• Prediction of the parallel/antiparallel orientation of beta-strands using amino acid pairing preferences and support vector machines
• Structural relatedness via flow networks in protein sequence space
• A method to distinguish between lysine acetylation and lysine methylation from protein sequences
• Predicting plant protein subcellular multi-localization by Chou's PseAAC formulation based multi-label homolog knowledge transfer learning
• Prediction of protein structural classes by recurrence quantification analysis based on chaos game representation
• Elman RNN based classification of proteins sequences on account of their mutual information
• Annotating the protein-RNA interaction sites in proteins using evolutionary information and protein backbone structure
• Comprehensive comparative analysis and identification of RNA-binding protein domains: multi-class classification and feature selection
• Prediction of protein submitochondria locations based on data fusion of various features of sequences
• Predicting Golgi-resident protein types using pseudo amino acid compositions: approaches with positional specific physicochemical properties
• Identify five kinds of simple super-secondary structures with quadratic discriminant algorithm based on the chemical shifts
• mLASSO-Hum: a LASSO-based interpretable human-protein subcellular localization predictor
• Classification of membrane protein types using voting feature interval in combination with Chou's pseudo amino acid composition
• Some remarks on protein attribute prediction and pseudo amino acid composition
• Robust feature generation for protein subchloroplast location prediction with a weighted GO transfer model
• A classification-based prediction model of messenger RNA polyadenylation sites
• Use of fuzzy clustering technique and matrices to classify amino acids and its impact to Chou's pseudo amino acid composition
• Identification of protein subcellular localization via integrating evolutionary and physicochemical information into Chou's general PseAAC
• Predicting DNA- and RNA-binding proteins from sequences with kernel methods
• Using the augmented Chou's pseudo amino acid composition for predicting protein submitochondria locations based on auto covariance approach
• Predict potential drug targets from the ion channel proteins based on SVM
• Using the concept of Chou's pseudo amino acid composition for risk type prediction of human papillomaviruses
• Multi-target QPDR classification model for human breast and colon cancer-related proteins using star graph topological indices
• Prediction of protein-protein interaction types using the decision templates based on multiple classier fusion
• A feature extraction technique using bi-gram probabilities of position specific scoring matrix for protein fold recognition
• High performance set of PseAAC and sequence based descriptors for protein classification
• The Burrows-Wheeler similarity distribution between biological sequences based on Burrows-Wheeler transform
• Enzymes/non-enzymes classification model complexity based on composition, sequence, 3D and topological indices
• Natural/random protein classification models based on star network topological indices
• Predicting protein structural classes with pseudo amino acid composition: an approach using geometric moments of cellular automaton image
• Feature extraction by statistical contact potentials and wavelet transform for predicting subcellular localizations in gram negative bacterial proteins
• Multi-kernel transfer learning based on Chou's PseAAC formulation for protein submitochondria localization
• Prediction of Golgi-resident protein types using general form of Chou's pseudo-amino acid compositions: approaches with minimal redundancy maximal relevance feature selection
• CE-PLoc: An ensemble classifier for predicting protein subcellular locations by fusing different modes of pseudo amino acid composition
• Predicting Gram-positive bacterial protein subcellular localization based on localization motifs
• Neural network and SVM classifiers accurately predict lipid binding proteins, irrespective of sequence homology
• Protein fold recognition by alignment of amino acid residues using kernelized dynamic time warping
• Predicting ion channels and their types by the dipeptide mode of pseudo amino acid composition
• GOASVM: a subcellular location predictor by incorporating term-frequency gene ontology into the general form of Chou's pseudo-amino acid composition
• Discrimination of acidic and alkaline enzyme using Chou's pseudo amino acid composition in conjunction with probabilistic neural network model
• Gram-positive and Gram-negative protein subcellular localization by incorporating evolutionary-based descriptors into Chou's general PseAAC
• PSSM-Suc: accurately predicting succinylation using position specific scoring matrix into bigram for feature extraction
• Prediction of metastasis in advanced colorectal carcinomas using CGH data
• Knowledge-based computational mutagenesis for predicting the disease potential of human non-synonymous single nucleotide polymorphisms
• SubChlo: predicting protein subchloroplast locations with pseudo-amino acid composition and the evidence-theoretic \(K\)-nearest neighbor (ET-KNN) algorithm
• Accurate in silico identification of protein succinylation sites using an iterative semi-supervised learning technique
• pLoc\_bal-mGneg: predict subcellular localization of Gram-negative bacterial proteins by quasi-balancing training dataset and general PseAAC
• Predicting membrane protein types by fusing composite protein sequence features into pseudo amino acid composition
• \textbf{iLoc-Virus}: a multi-label learning classifier for identifying the subcellular localization of virus proteins with both single and multiple sites
• BacPP: bacterial promoter prediction -- a tool for accurate sigma-factor specific assignment in enterobacteria
• Multiclass cancer classification by support vector machines with class-wise optimized genes and probability estimates
• Predicting mycobacterial proteins subcellular locations by incorporating pseudo-average chemical shift into the general form of Chou's pseudo amino acid composition
• Gneg-mPLoc: a top-down strategy to enhance the quality of predicting subcellular localization of Gram-negative bacterial proteins
• iMethyl-STTNC: identification of N\(^6\)-methyladenosine sites by extending the idea of SAAC into Chou's PseAAC to formulate RNA sequences
• Characterization of structure-antioxidant activity relationship of peptides in free radical systems using QSAR models: key sequence positions and their amino acid properties
• Predicting promoters by pseudo-trinucleotide compositions based on discrete wavelets transform
• Molecular modeling of BAD complex resided in a mitochondrion integrating glycolysis and apoptosis
• Identifying N\(^6\)-methyladenosine sites using extreme gradient boosting system optimized by particle swarm optimizer
• Prediction of protein-protein interaction sites using patch-based residue characterization
• \textit{SVM} ensemble based transfer learning for large-scale membrane proteins discrimination
• A new hybrid fractal algorithm for predicting thermophilic nucleotide sequences
• Two-intermediate model to characterize the structure of fast-folding proteins
• A segmented principal component analysis -- regression approach to QSAR study of peptides
• RFCRYS: sequence-based protein crystallization propensity prediction by means of random forest
• \textit{In vitro} transcriptomic prediction of hepatotoxicity for early drug discovery
• Discriminating bioluminescent proteins by incorporating average chemical shift and evolutionary information into the general form of Chou's pseudo amino acid composition
• Interrogating noise in protein sequences from the perspective of protein-protein interactions prediction
• Constructing a linear QSAR for some metabolizable drugs by human or pig flavin-containing monooxygenases using some molecular features selected by a genetic algorithm trained SVM
• Human proteins characterization with subcellular localizations
• MFSC: multi-voting based feature selection for classification of Golgi proteins by adopting the general form of Chou's PseAAC components
• A simple method to analyze the similarity of biological sequences based on the fuzzy theory
• Protein classification using texture descriptors extracted from the protein backbone image

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