Constructing a linear QSAR for some metabolizable drugs by human or pig flavin-containing monooxygenases using some molecular features selected by a genetic algorithm trained SVM

DOI10.1016/J.JTBI.2014.04.021MaRDI QIDQ2415560zbMATH OpenOpenAlexWikidataFDO

Authors Thy-Hou Lin, Tsung-Lin Tsai

Publication date 23 May 2019

Published in Journal of Theoretical Biology (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.jtbi.2014.04.021

zbMATH Keywords

feature maskfeature selectionsupport vector machine

Mathematics Subject Classification ID

Learning and adaptive systems in artificial intelligence (68T05) Biochemistry, molecular biology (92C40)

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Cites work

• 10.1162/153244303322753616
• A novel feature representation method based on Chou's pseudo amino acid composition for protein structural class prediction
• A survey of accuracy evaluation metrics of recommendation tasks
• An efficient method for finding the minimum of a function of several variables without calculating derivatives
• scientific article; zbMATH DE number 1086070 (Why is no real title available?)
• iCDI-PseFpt: identify the channel-drug interaction in cellular networking with PseAAC and molecular fingerprints
• Large-scale linear support vector regression
• Physics and chemistry-driven artificial neural network for predicting bioactivity of peptides and proteins and their design
• Predicting anticancer peptides with Chou's pseudo amino acid composition and investigating their mutagenicity via ames test
• Some remarks on protein attribute prediction and pseudo amino acid composition
• Support-vector networks
• Using stacked generalization to predict membrane protein types based on pseudo-amino acid composition
• Using the concept of Chou's pseudo amino acid composition for risk type prediction of human papillomaviruses
• Working set selection using second order information for training support vector machines

Cited in

(1)

• Comparison of two methods forecasting binding rate of plasma protein

Describes a project that uses

Uses Software

• iSNO-PseAAC
• iNuc-PseKNC
• iNuc-PhysChem
• iEzy-drug
• iHSP-PseRAAAC
• iNR-PhysChem
• iCDI-PseFpt
• DistAl
• WEKA
• iRSpot-PseDNC
• Cell-PLoc
• iRSpot-TNCPseAAC
• E-DRAGON

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