Multi-kernel transfer learning based on Chou's PseAAC formulation for protein submitochondria localization
DOI10.1016/J.JTBI.2011.10.015zbMATH Open1307.92085OpenAlexW1986465827WikidataQ38500179 ScholiaQ38500179MaRDI QIDQ2263504FDOQ2263504
Authors: Suyu Mei 
Publication date: 18 March 2015
Published in: Journal of Theoretical Biology (Search for Journal in Brave)
Full work available at URL: https://doi.org/10.1016/j.jtbi.2011.10.015
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transfer learningperformance overestimationprotein subcellular localizationgene ontologynon-parametric multiple kernel learning
Learning and adaptive systems in artificial intelligence (68T05) Biochemistry, molecular biology (92C40) Protein sequences, DNA sequences (92D20)
Cites Work
- \textbf{iLoc-Virus}: a multi-label learning classifier for identifying the subcellular localization of virus proteins with both single and multiple sites
- Some remarks on protein attribute prediction and pseudo amino acid composition
- Use of fuzzy clustering technique and matrices to classify amino acids and its impact to Chou's pseudo amino acid composition
- A novel feature representation method based on Chou's pseudo amino acid composition for protein structural class prediction
- Using the concept of Chou's pseudo amino acid composition for risk type prediction of human papillomaviruses
- The modified Mahalanobis discriminant for predicting outer membrane proteins by using Chou's pseudo amino acid composition
- Using the augmented Chou's pseudo amino acid composition for predicting protein submitochondria locations based on auto covariance approach
- SecretP: identifying bacterial secreted proteins by fusing new features into Chou's pseudo-amino acid composition
- Prediction of GABA\(_{\mathrm A}\) receptor proteins using the concept of Chou's pseudo-amino acid composition and support vector machine
- Using Chou's amphiphilic pseudo-amino acid composition and support vector machine for prediction of enzyme subfamily classes
Cited In (11)
- Predicting protein submitochondrial locations by incorporating the pseudo-position specific scoring matrix into the general Chou's pseudo-amino acid composition
- Predicting protein subchloroplast locations with both single and multiple sites via three different modes of Chou's pseudo amino acid compositions
- Predicting plant protein subcellular multi-localization by Chou's PseAAC formulation based multi-label homolog knowledge transfer learning
- Comprehensive comparative analysis and identification of RNA-binding protein domains: multi-class classification and feature selection
- Corrigendum to ``Multi-kernel transfer learning based on Chou's pseaac formulation for protein submitochondria localization
- \textit{SVM} ensemble based transfer learning for large-scale membrane proteins discrimination
- Prediction of protein submitochondria locations based on data fusion of various features of sequences
- Robust feature generation for protein subchloroplast location prediction with a weighted GO transfer model
- Prediction of \(\beta\)-lactamase and its class by Chou's pseudo-amino acid composition and support vector machine
- Protein subcellular localization in human and hamster cell lines: employing local ternary patterns of fluorescence microscopy images
- Characterization of structure-antioxidant activity relationship of peptides in free radical systems using QSAR models: key sequence positions and their amino acid properties
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