CE-PLoc: An ensemble classifier for predicting protein subcellular locations by fusing different modes of pseudo amino acid composition
DOI10.1016/J.COMPBIOLCHEM.2011.05.003zbMATH Open1226.92020DBLPjournals/candc/KhanMH11OpenAlexW2076974281WikidataQ51537796 ScholiaQ51537796MaRDI QIDQ647294FDOQ647294
Authors: Asifullah Khan, Abdul Majid, Maqsood Hayat 
Publication date: 22 November 2011
Published in: Computational Biology and Chemistry (Search for Journal in Brave)
Full work available at URL: https://doi.org/10.1016/j.compbiolchem.2011.05.003
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Biochemistry, molecular biology (92C40) Probabilistic models, generic numerical methods in probability and statistics (65C20) Computational methods for problems pertaining to biology (92-08) Cell biology (92C37)
Cites Work
- SubChlo: predicting protein subchloroplast locations with pseudo-amino acid composition and the evidence-theoretic \(K\)-nearest neighbor (ET-KNN) algorithm
- Lysine acetylation sites prediction using an ensemble of support vector machine classifiers
- Pattern classification.
- Measures of diversity in classifier ensembles and their relationship with the ensemble accuracy
- Some remarks on protein attribute prediction and pseudo amino acid composition
- A novel feature representation method based on Chou's pseudo amino acid composition for protein structural class prediction
- The modified Mahalanobis discriminant for predicting outer membrane proteins by using Chou's pseudo amino acid composition
- A novel representation for apoptosis protein subcellular localization prediction using support vector machine
- Predicting membrane protein types by fusing composite protein sequence features into pseudo amino acid composition
- Multiclass cancer classification by support vector machines with class-wise optimized genes and probability estimates
- A protein fold classifier formed by fusing different modes of pseudo amino acid composition via PSSM
- Gneg-mPLoc: a top-down strategy to enhance the quality of predicting subcellular localization of Gram-negative bacterial proteins
- Prediction protein structural classes with pseudo-amino acid composition: approximate entropy and hydrophobicity pattern
- An ensemble of models of the acute inflammatory response to bacterial lipopolysaccharide in rats: results from parameter space reduction
- Predicting \(O\)-glycosylation sites in mammalian proteins by using SVMs
- Combination of support vector machines using genetic programming
- Prediction of protein subcellular location using hydrophobic patterns of amino acid sequence
Cited In (5)
- MemHyb: predicting membrane protein types by hybridizing SAAC and PSSM
- Using nearest feature line and tunable nearest neighbor methods for prediction of protein subcellular locations
- SubChlo: predicting protein subchloroplast locations with pseudo-amino acid composition and the evidence-theoretic \(K\)-nearest neighbor (ET-KNN) algorithm
- Protein subcellular localization in human and hamster cell lines: employing local ternary patterns of fluorescence microscopy images
- pLoc\_bal-mGneg: predict subcellular localization of Gram-negative bacterial proteins by quasi-balancing training dataset and general PseAAC
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