Time dependent solution for acceleration of tau-leaping

DOI10.1016/j.jcp.2012.10.036zbMath1291.65019OpenAlexW2080512277MaRDI QIDQ2249360

Jin Fu, Sheng Wu, Linda R. Petzold

Publication date: 1 July 2014

Published in: Journal of Computational Physics (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.jcp.2012.10.036

zbMATH Keywords

time dependent solutionstochastic simulationtau-leapingenzyme substrate system

Mathematics Subject Classification ID

Biochemistry, molecular biology (92C40) Computational methods for stochastic equations (aspects of stochastic analysis) (60H35) Numerical solutions to stochastic differential and integral equations (65C30)

Related Items (3)

An exact and efficient first passage time algorithm for reaction-diffusion processes on a 2D-lattice ⋮ The time dependent propensity function for acceleration of spatial stochastic simulation of reaction-diffusion systems ⋮ Accelerated simulation of stochastic particle removal processes in particle-resolved aerosol models

Cites Work

• Efficient simulation of discrete stochastic reaction systems with a splitting method
• Slow-scale tau-leaping method
• The Quasi-Steady-State Assumption: A Case Study in Perturbation

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