Bayesian protein structure alignment

DOI10.1214/14-AOAS780zbMath1454.62387arXiv1501.03971WikidataQ30385034 ScholiaQ30385034MaRDI QIDQ2258561

Scott C. Schmidler, Abel Rodríguez

Publication date: 26 February 2015

Published in: The Annals of Applied Statistics (Search for Journal in Brave)

Full work available at URL: https://arxiv.org/abs/1501.03971

zbMATH Keywords

dynamic programmingstructure alignmentprotein alignmentProcrustes distanceaffine gap

Mathematics Subject Classification ID

Applications of statistics to biology and medical sciences; meta analysis (62P10) Bayesian inference (62F15)

Related Items (3)

Bayesian comparison of protein structures using partial Procrustes distance ⋮ Unlabelled landmark matching via Bayesian data selection, and application to cell matching across imaging modalities ⋮ Bayesian alignment of similarity shapes

Uses Software

• Balibase
• MAMMOTH

Cites Work

• Inference from iterative simulation using multiple sequences
• The statistical theory of shape
• Bayesian matching of unlabeled point sets using Procrustes and configuration models
• Biological Sequence Analysis
• Statistical Analysis of Unlabeled Point Sets: Comparing Molecules in Chemoinformatics
• Bayesian alignment using hierarchical models, with applications in protein bioinformatics
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