Simulation of Y-chromosomal haplotype data

DOI10.1016/J.MBS.2009.12.002MaRDI QIDQ2269779zbMATHOpenAlexWikidataFDO

Authors C. Koen, M. D'Amato

Publication date 11 March 2010

Published in Mathematical Biosciences (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.mbs.2009.12.002

zbMATH Keywords

Y-chromosomehaplotype simulationinter-locus correlation

Mathematics Subject Classification ID

Applications of statistics to biology and medical sciences; meta analysis (62P10) Genetics and epigenetics (92D10)

Recommendations

• Ancestral inference from haplotypes and mutations
• The discrete Laplace exponential family and estimation of Y-STR haplotype frequencies
• Backward simulation of ancestors of sampled individuals
• Probability distribution of haplotype frequencies under the two-locus Wright-Fisher model by diffusion approximation
• Models for haplotype evolution in a nonstationary population

Cites work

• scientific article; zbMATH DE number 3553634 (Why is no real title available?)
• scientific article; zbMATH DE number 3436435 (Why is no real title available?)
• scientific article; zbMATH DE number 2153831 (Why is no real title available?)
• scientific article; zbMATH DE number 824933 (Why is no real title available?)
• A $k$-Sample Model in Order Statistics
• Computing the nearest correlation matrix--a problem from finance
• Mathematical Statistics with Applications
• Numerical recipes. The art of scientific computing.
• Some simple methods for generating correlated categorical variates

Cited in

(1)

• Genetic Models with Reduced Penetrance Related to the Y Chromosome

Describes a project that uses

Uses Software

• WHICHRUN
• GENECLASS2
• HapSim

This page was built for publication: Simulation of Y-chromosomal haplotype data

Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q2269779)