Backward simulation of ancestors of sampled individuals

DOI10.1016/J.TPB.2004.08.003MaRDI QIDQ2565623zbMATH OpenOpenAlexWikidataFDO

Authors Dario Gasbarra, M. J. Sillanpää, Elja Arjas

Publication date 28 September 2005

Published in Theoretical Population Biology (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.tpb.2004.08.003

zbMATH Keywords

coalescentDirichlet distributionPolya urncomplex pedigreescromosome simulations

Mathematics Subject Classification ID

Genetics and epigenetics (92D10) Problems related to evolution (92D15) Probabilistic models, generic numerical methods in probability and statistics (65C20)

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Cites work

• A classification of coalescent processes for haploid exchangeable population models
• Coalescent patterns in diploid exchangeable population models
• Coalescing into the 21st century: An overview and prospects of coalescent theory
• Ferguson distributions via Polya urn schemes
• Gene mapping via the ancestral recombination graph
• Properties of a neutral allele model with intragenic recombination
• The coalescent
• The latent roots of certain Markov chains arising in genetics: A new approach, II. Further haploid models

Cited in

(6)

• Estimating genealogies from unlinked marker data: a Bayesian approach
• Simulating realistic zero loop pedigrees using a bipartite Prufer code and graphical modelling
• Probability distribution of haplotype frequencies under the two-locus Wright-Fisher model by diffusion approximation
• Markovian simulation for ancestors trees
• Simulation of Y-chromosomal haplotype data
• Metapopulation inbreeding dynamics, effective size and subpopulation differentiation -- a general analytical approach for diploid organisms

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