Graph-theoretic partitioning of RNAs and classification of pseudoknots

DOI10.1007/978-3-030-18174-1_5MaRDI QIDQ2315501zbMATH OpenOpenAlexFDO

Authors L. Petingi, Tamar Schlick

Publication date 25 July 2019

Full work available at URL https://doi.org/10.1007/978-3-030-18174-1_5

zbMATH Keywords

bi-connectivitygraph theorypartitioningpseudoknotsRNA secondary structures

Mathematics Subject Classification ID

Applications of graph theory (05C90) Protein sequences, DNA sequences (92D20)

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Cited in

(5)

• Graph Representations and Algorithms in Computational Biology of RNA Secondary Structure
• Combinatorial Computational Biology of RNA
• Visualization of RNA secondary structure with pseudoknots
• Classifying RNA pseudoknotted structures
• A graphical criterion of planarity for RNA secondary structures with pseudoknots in Rivas-Eddy class

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