The linear noise approximation for spatially dependent biochemical networks
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Cites work
- scientific article; zbMATH DE number 5681750 (Why is no real title available?)
- A hierarchy of approximations of the master equation scaled by a size parameter
- Analysis and design of jump coefficients in discrete stochastic diffusion models
- Approximating intrinsic noise in continuous multispecies models
- Approximation and inference methods for stochastic biochemical kinetics -- a tutorial review
- Boundary Value Problems of Mathematical Physics: Volume 2
- Handbook of stochastic methods for physics, chemistry and the natural sciences.
- Incorporating Diffusion in Complex Geometries into Stochastic Chemical Kinetics Simulations
- Inference for reaction networks using the linear noise approximation
- Investigating the two-moment characterisation of subcellular biochemical networks
- Limit theorems for sequences of jump Markov processes approximating ordinary differential processes
- Local error estimates for adaptive simulation of the reaction-diffusion master equation via operator splitting
- Markov chain Monte Carlo inference for Markov jump processes via the linear noise approximation
- Markovian dynamics on complex reaction networks
- Multiscale Simulation of Stochastic Reaction-Diffusion Networks
- Multiscale stochastic simulation algorithm with stochastic partial equilibrium assumption for chemically reacting systems
- Nested stochastic simulation algorithms for chemical kinetic systems with multiple time scales
- On the Construction and Comparison of Difference Schemes
- Operator splitting
- Product-form stationary distributions for deficiency zero chemical reaction networks
- Signatures of nonlinearity in single cell noise-induced oscillations
- Simple Brownian diffusion. An introduction to the standard theoretical models
- Simulation of stochastic reaction-diffusion processes on unstructured meshes
- Solutions of ordinary differential equations as limits of pure jump markov processes
- Solving the chemical master equation for monomolecular reaction systems analytically
- Stochastic pattern formation and spontaneous polarisation: the linear noise approximation and beyond
- Stochastic processes in physics and chemistry.
- The Fokker-Planck equation. Methods of solutions and applications.
Cited in
(5)- Stochastic simulation of biochemical systems: in memory of Dan T. Gillespie's contributions
- Propagation of fluctuations in biochemical systems. I: Linear SSC networks
- Bounded Extrinsic Noises Affecting Biochemical Networks with Low Molecule Numbers
- Approximation of probabilistic reachability for chemical reaction networks using the linear noise approximation
- LNA++: linear noise approximation with first and second order sensitivities
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