A hierarchy of approximations of the master equation scaled by a size parameter
DOI10.1007/S10915-007-9179-ZzbMATH Open1136.65007DBLPjournals/jscic/FermLH08OpenAlexW2155007800WikidataQ63407454 ScholiaQ63407454MaRDI QIDQ2481381FDOQ2481381
Authors: Lars Ferm, Andreas Hellander, Per Lötstedt 
Publication date: 9 April 2008
Published in: Journal of Scientific Computing (Search for Journal in Brave)
Full work available at URL: https://doi.org/10.1007/s10915-007-9179-z
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algorithmsnumerical exampleserror estimatespopulation dynamicsmolecular biologyMaster equationLinear noise approximationmigration of peopleMoment equationsReaction rate equations
Population dynamics (general) (92D25) Stochastic ordinary differential equations (aspects of stochastic analysis) (60H10) Computational methods for stochastic equations (aspects of stochastic analysis) (60H35) Numerical solutions to stochastic differential and integral equations (65C30) Molecular structure (graph-theoretic methods, methods of differential topology, etc.) (92E10)
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Cited In (25)
- Inference for reaction networks using the linear noise approximation
- Delayed acceptance particle MCMC for exact inference in stochastic kinetic models
- The linear noise approximation for spatially dependent biochemical networks
- Posterior inference on parameters of stochastic differential equations via non-linear Gaussian filtering and adaptive MCMC
- An algebraic method to calculate parameter regions for constrained steady-state distribution in stochastic reaction networks
- A Linear Programming Approach to Parameter Fitting for the Master Equation
- Master equation solution of a plant disease model
- Computing the moments of high dimensional solutions of the master equation
- Jump longer to jump less: improving dynamic boundary projection with \(h\)-scaling
- Multiscale Simulation of Stochastic Reaction-Diffusion Networks
- Accelerating Bayesian inference for stochastic epidemic models using incidence data
- On the assumption of initial factorization in the master equation for weakly coupled systems. II: Solvable models
- Correlated pseudo-marginal schemes for time-discretised stochastic kinetic models
- Predictive modeling of cholera outbreaks in Bangladesh
- Markovian dynamics on complex reaction networks
- Simulation of stochastic diffusion via first exit times
- Bayesian inference for Markov jump processes with informative observations
- Markov chain Monte Carlo inference for Markov jump processes via the linear noise approximation
- On the Gaussian approximation for master equations
- System-size expansion of the moments of a master equation
- Efficient \(\mathrm{SMC}^2\) schemes for stochastic kinetic models
- Solving chemical master equations by adaptive wavelet compression
- A graph-based approach for the approximate solution of the chemical master equation
- Diagnostics for assessing the linear noise and moment closure approximations
- Hysteresis effects in social behavior with parasitic infection
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