Sequential reprogramming of Boolean networks made practical

DOI10.1007/978-3-030-31304-3_1MaRDI QIDQ2326580zbMATH OpenOpenAlexFDO

Authors Hugues Mandon, Cui Su, Stefan Haar, Jun Pang, Loïc Paulevé

Publication date 10 October 2019

Full work available at URL https://doi.org/10.1007/978-3-030-31304-3_1

zbMATH Keywords

attractorsBoolean networkscell reprogramming

Mathematics Subject Classification ID

Biochemistry, molecular biology (92C40) Systems biology, networks (92C42)

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Cited in

(14)

• Sequential temporary and permanent control of Boolean networks
• Variable stabilisation in Boolean monotonic model pools
• Petri nets semantics of reaction rules (RR). A language for ecosystems modelling
• Relationship between the reprogramming determinants of Boolean networks and their interaction graph
• Temporal reprogramming of Boolean networks
• Sequential reprogramming of biological network fate
• Sequential reprogramming of biological network fate
• Phenotype control of partially specified Boolean networks
• The maximal coordination principle in regulatory Boolean networks
• From Boolean networks to linear dynamical systems: a simplified route
• A P systems variant for reasoning about sequential controllability of Boolean networks
• P versus B: P systems as a formal framework for controllability of Boolean networks
• Tackling universal properties of minimal trap spaces of Boolean networks
• Controlling large Boolean networks with temporary and permanent perturbations

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