Temporal reprogramming of Boolean networks

DOI10.1007/978-3-319-67471-1_11MaRDI QIDQ5227328zbMATH OpenOpenAlexFDO

Authors Hugues Mandon, Stefan Haar, Loïc Paulevé

Publication date 25 July 2019

Published in Computational Methods in Systems Biology (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1007/978-3-319-67471-1_11

zbMATH Keywords

regulatory Boolean networkstemporal cellular reprogramming

Mathematics Subject Classification ID

Applications of graph theory (05C90) Models and methods for concurrent and distributed computing (process algebras, bisimulation, transition nets, etc.) (68Q85) Systems biology, networks (92C42) Medical applications (general) (92C50)

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(9)

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• Sequential reprogramming of Boolean networks made practical
• Cell reprogramming modelled as transitions in a hierarchy of cell cycles
• Relationship between the reprogramming determinants of Boolean networks and their interaction graph
• Sequential reprogramming of biological network fate
• Sequential reprogramming of biological network fate
• Phenotype control of partially specified Boolean networks
• A P systems variant for reasoning about sequential controllability of Boolean networks
• P versus B: P systems as a formal framework for controllability of Boolean networks

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