Unwinding biological systems
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- A semantic equivalence for Bio-PEPA based on discretisation of continuous values
- A theory of timed automata
- Approximating and computing behavioural distances in probabilistic transition systems
- Bio-PEPA: A framework for the modelling and analysis of biological systems
- BioAmbients: an abstraction for biological compartments
- Bitonal membrane systems: interactions of biological membranes
- Brane Calculi
- CCS expressions, finite state processes, and three problems of equivalence
- Compositionality of approximate bisimulation for probabilistic systems
- Computational Methods in Systems Biology
- Computer Aided Verification
- Continuous valuations of temporal logic specifications with applications to parameter optimization and robustness measures
- Dynamically consistent reduction of logical regulatory graphs
- Dynamics of influenza virus and human host interactions during infection and replication cycle
- External Interactions on Hybrid Models of Biological Systems
- Formal molecular biology
- Hybrid I/O automata.
- Inclusion dynamics hybrid automata
- Lumpability abstractions of rule-based systems
- Model decomposition and reduction tools for large-scale networks in systems biology
- O-minimal hybrid systems.
- On-the-fly exact computation of bisimilarity distances
- Robust satisfaction of temporal logic over real-valued signals
- Robustness of temporal logic specifications for continuous-time signals
- Simulation and Bisimulation for Probabilistic Timed Automata
- Some investigations concerning the CTMC and the ODE model derived from bio-PEPA
- State equivalences for rectangular hybrid automata
- Three Partition Refinement Algorithms
- Weighted lumpability on Markov chains
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