Using temperature effects to predict the interactions between two RNAs

DOI10.1016/j.jtbi.2014.09.001zbMath1405.92094OpenAlexW2037320676WikidataQ47729628 ScholiaQ47729628MaRDI QIDQ2413893

Soheila Montaseri, Mohammad Ganjtabesh, Fatemeh Zare-Mirakabad

Publication date: 17 September 2018

Published in: Journal of Theoretical Biology (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.jtbi.2014.09.001

zbMATH Keywords

RNA secondary structureminimum free energyRNA-RNA interaction

Mathematics Subject Classification ID

Biochemistry, molecular biology (92C40) Protein sequences, DNA sequences (92D20) Software, source code, etc. for problems pertaining to biology (92-04)

Uses Software

• iSS-PseDNC
• iCTX-Type
• iMethyl-PseAAC
• TIRNA

Cites Work

• A grammatical approach to RNA-RNA interaction prediction
• Some remarks on protein attribute prediction and pseudo amino acid composition
• A heuristic approach to RNA-RNA interaction prediction
• iCDI-PseFpt: identify the channel-drug interaction in cellular networking with PseAAC and molecular fingerprints
• Thermodynamic Analysis of Interacting Nucleic Acid Strands
• Research in Computational Molecular Biology

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