Are \textit{in vitro} estimates of cell diffusivity and cell proliferation rate sensitive to assay geometry?

DOI10.1016/J.JTBI.2014.04.026MaRDI QIDQ2415557zbMATH OpenOpenAlexWikidataFDO

Authors Katrina K. Treloar, Ruth E. Baker, Matthew J. Simpson, D. L. Sean McElwain

Publication date 23 May 2019

Published in Journal of Theoretical Biology (Search for Journal in Brave)

Copyright license Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International

Full work available at URL https://doi.org/10.1016/j.jtbi.2014.04.026

zbMATH Keywords

cancercircular barrier assaycollective cell spreadingrandom walk modelwound-healing

Mathematics Subject Classification ID

Cell movement (chemotaxis, etc.) (92C17) Cell biology (92C37)

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Cites work

• A hybrid discrete-continuum mathematical model of pattern prediction in the developing retinal vasculature
• Assessment of a non-traditional operator split algorithm for simulation of reactive transport
• Continuous and discrete mathematical models of tumor-induced angiogenesis
• Lattice-free models of cell invasion: discrete simulations and travelling waves
• Multi-scale modeling of a wound-healing cell migration assay
• Single-cell-based models in biology and medicine.
• Travelling waves in a wound healing assay.

Cited in

(18)

• Extended logistic growth model for heterogeneous populations
• Model-based data analysis of tissue growth in thin 3D printed scaffolds
• Extinction of bistable populations is affected by the shape of their initial spatial distribution
• Pattern formation and front stability for a moving-boundary model of biological invasion and recession
• A sharp-front moving boundary model for malignant invasion
• The effect of geometry on survival and extinction in a moving-boundary problem motivated by the Fisher-KPP equation
• Hole-closing model reveals exponents for nonlinear degenerate diffusivity functions in cell biology
• A free boundary model of epithelial dynamics
• Choosing an appropriate modelling framework for analysing multispecies co-culture cell biology experiments
• A Bayesian computational approach to explore the optimal duration of a cell proliferation assay
• Reliable and efficient parameter estimation using approximate continuum limit descriptions of stochastic models
• The universal growth rate behavior and regime transition in adherent cell colonies
• Reproducibility of scratch assays is affected by the initial degree of confluence: experiments, modelling and model selection
• Critical length for the spreading-vanishing dichotomy in higher dimensions
• Revisiting the Fisher-Kolmogorov-Petrovsky-Piskunov equation to interpret the spreading-extinction dichotomy
• Modelling collective invasion with reaction-diffusion equations: when does domain curvature matter?
• The effect of cell adhesion on the interpretation of scratch assay data: a non-local model
• Modeling keratinocyte wound healing dynamics: cell-cell adhesion promotes sustained collective migration

Describes a project that uses

Uses Software

• Image Acquisition Toolbox
• Matlab

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